Gene : Glyma.03G250700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  2507
Name:  ? Glyma.03G250700 Secondary Identifier:  ? PAC:30517901
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G250700 0.5kb upstream 0.5kb upstream 6231 true Chr03: 44637159-44643389 Glycine max
Glyma.03G250700 0.5kb upstream 0.5kb upstream 500 false Chr03: 44637159-44637658 Glycine max
Glyma.03G250700 0.5kb downstream 0.5kb downstream 6231 true Chr03: 44637659-44643889 Glycine max
Glyma.03G250700 0.5kb downstream 0.5kb downstream 500 false Chr03: 44643390-44643889 Glycine max
Glyma.03G250700 1.0kb upstream 1.0kb upstream 6731 true Chr03: 44636659-44643389 Glycine max
Glyma.03G250700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44636659-44637658 Glycine max
Glyma.03G250700 1.0kb downstream 1.0kb downstream 6731 true Chr03: 44637659-44644389 Glycine max
Glyma.03G250700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44643390-44644389 Glycine max
Glyma.03G250700 2.0kb upstream 2.0kb upstream 7731 true Chr03: 44635659-44643389 Glycine max
Glyma.03G250700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44635659-44637658 Glycine max
Glyma.03G250700 2.0kb downstream 2.0kb downstream 7731 true Chr03: 44637659-44645389 Glycine max
Glyma.03G250700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44643390-44645389 Glycine max
Glyma.03G250700 5.0kb upstream 5.0kb upstream 10731 true Chr03: 44632659-44643389 Glycine max
Glyma.03G250700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44632659-44637658 Glycine max
Glyma.03G250700 5.0kb downstream 5.0kb downstream 10731 true Chr03: 44637659-44648389 Glycine max
Glyma.03G250700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44643390-44648389 Glycine max
Glyma.03G250700 10.0kb upstream 10.0kb upstream 15731 true Chr03: 44627659-44643389 Glycine max
Glyma.03G250700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44627659-44637658 Glycine max
Glyma.03G250700 10.0kb downstream 10.0kb downstream 15731 true Chr03: 44637659-44653389 Glycine max
Glyma.03G250700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44643390-44653389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308195 5265 Fabidae View MSA
124063539 5270 Rosid View MSA
123738014 5271 Pentapetalae View MSA
122791822 5272 Eudicot View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.2518 0.0 80.7423 High High
cufflinks 19.6426 0.0 52.6877    
cufflinks 10.283 0.0 28.6828   Low
cufflinks 14.0309 0.0 38.223    
cufflinks 13.6831 0.0 37.4239    
cufflinks 9.7463 0.0 27.4053   Low
cufflinks 20.6577 0.0 55.385    
cufflinks 18.5824 0.0 49.9401    
cufflinks 12.8511 0.0 35.2641    
cufflinks 2.355        
cufflinks 1.054       Low
cufflinks 2.14        
cufflinks 2.046        
cufflinks 2.516        
cufflinks 1.282       Low
cufflinks 4.379       High
cufflinks 1.589        
cufflinks 2.333        
cufflinks 3.004        
cufflinks 3.73        
cufflinks 1.51        
cufflinks 3.811       High
cufflinks 4.891       High
cufflinks 1.175       Low
cufflinks 4.608       High
cufflinks 1.508        

0 Strain