Gene : Glyma.03G246500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12143 - PEPTIDE N-GLYCANASE PNGASE -RELATED Genomic Order:  2465
Name:  ? Glyma.03G246500 Secondary Identifier:  ? PAC:30515440
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G246500 0.5kb upstream 0.5kb upstream 9474 true Chr03: 44341465-44350938 Glycine max
Glyma.03G246500 0.5kb upstream 0.5kb upstream 500 false Chr03: 44350439-44350938 Glycine max
Glyma.03G246500 0.5kb downstream 0.5kb downstream 9474 true Chr03: 44340965-44350438 Glycine max
Glyma.03G246500 0.5kb downstream 0.5kb downstream 500 false Chr03: 44340965-44341464 Glycine max
Glyma.03G246500 1.0kb upstream 1.0kb upstream 9974 true Chr03: 44341465-44351438 Glycine max
Glyma.03G246500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44350439-44351438 Glycine max
Glyma.03G246500 1.0kb downstream 1.0kb downstream 9974 true Chr03: 44340465-44350438 Glycine max
Glyma.03G246500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44340465-44341464 Glycine max
Glyma.03G246500 2.0kb upstream 2.0kb upstream 10974 true Chr03: 44341465-44352438 Glycine max
Glyma.03G246500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44350439-44352438 Glycine max
Glyma.03G246500 2.0kb downstream 2.0kb downstream 10974 true Chr03: 44339465-44350438 Glycine max
Glyma.03G246500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44339465-44341464 Glycine max
Glyma.03G246500 5.0kb upstream 5.0kb upstream 13974 true Chr03: 44341465-44355438 Glycine max
Glyma.03G246500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44350439-44355438 Glycine max
Glyma.03G246500 5.0kb downstream 5.0kb downstream 13974 true Chr03: 44336465-44350438 Glycine max
Glyma.03G246500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44336465-44341464 Glycine max
Glyma.03G246500 10.0kb upstream 10.0kb upstream 18974 true Chr03: 44341465-44360438 Glycine max
Glyma.03G246500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44350439-44360438 Glycine max
Glyma.03G246500 10.0kb downstream 10.0kb downstream 18974 true Chr03: 44331465-44350438 Glycine max
Glyma.03G246500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44331465-44341464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302619 5265 Fabidae View MSA
124067325 5270 Rosid View MSA
123748709 5271 Pentapetalae View MSA
122792464 5272 Eudicot View MSA
122051116 5273 Angiosperm View MSA
121344308 5274 Embryophyte View MSA
123425533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9361 0.0 65.122   High
cufflinks 6.67518 0.0 29.918    
cufflinks 7.44642 0.0 28.869    
cufflinks 9.18668 0.0 43.4337    
cufflinks 6.2279 0.0 25.2771    
cufflinks 9.94937 0.0 33.8867    
cufflinks 8.30196 0.0 33.7821    
cufflinks 6.49308 0.0 29.3825    
cufflinks 7.13889 0.0 31.8486    
cufflinks 0.549        
cufflinks 0.335       Low
cufflinks 0.637        
cufflinks 0.687        
cufflinks 0.498        
cufflinks 0.395       Low
cufflinks 0.683        
cufflinks 0.449        
cufflinks 0.764       High
cufflinks 0.66        
cufflinks 0.685        
cufflinks 0.406       Low
cufflinks 0.798       High
cufflinks 0.531        
cufflinks 0.449        
cufflinks 0.654        
cufflinks 0.418       Low

0 Strain