Gene : Glyma.03G001300 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  13
Name:  ? Glyma.03G001300 Secondary Identifier:  ? PAC:30517796
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G001300 0.5kb upstream 0.5kb upstream 5109 true Chr03: 153959-159067 Glycine max
Glyma.03G001300 0.5kb upstream 0.5kb upstream 500 false Chr03: 153959-154458 Glycine max
Glyma.03G001300 0.5kb downstream 0.5kb downstream 5109 true Chr03: 154459-159567 Glycine max
Glyma.03G001300 0.5kb downstream 0.5kb downstream 500 false Chr03: 159068-159567 Glycine max
Glyma.03G001300 1.0kb upstream 1.0kb upstream 5609 true Chr03: 153459-159067 Glycine max
Glyma.03G001300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 153459-154458 Glycine max
Glyma.03G001300 1.0kb downstream 1.0kb downstream 5609 true Chr03: 154459-160067 Glycine max
Glyma.03G001300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 159068-160067 Glycine max
Glyma.03G001300 2.0kb upstream 2.0kb upstream 6609 true Chr03: 152459-159067 Glycine max
Glyma.03G001300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 152459-154458 Glycine max
Glyma.03G001300 2.0kb downstream 2.0kb downstream 6609 true Chr03: 154459-161067 Glycine max
Glyma.03G001300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 159068-161067 Glycine max
Glyma.03G001300 5.0kb upstream 5.0kb upstream 9609 true Chr03: 149459-159067 Glycine max
Glyma.03G001300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 149459-154458 Glycine max
Glyma.03G001300 5.0kb downstream 5.0kb downstream 9609 true Chr03: 154459-164067 Glycine max
Glyma.03G001300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 159068-164067 Glycine max
Glyma.03G001300 10.0kb upstream 10.0kb upstream 14609 true Chr03: 144459-159067 Glycine max
Glyma.03G001300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 144459-154458 Glycine max
Glyma.03G001300 10.0kb downstream 10.0kb downstream 14609 true Chr03: 154459-169067 Glycine max
Glyma.03G001300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 159068-169067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027219 5273 Angiosperm View MSA
122302236 5265 Fabidae View MSA
124070657 5270 Rosid View MSA
123745654 5271 Pentapetalae View MSA
122794629 5272 Eudicot View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.686305 0.0 2.36207    
cufflinks 0.51851 0.0 1.82818    
cufflinks 1.45926 0.0 4.53018   High
cufflinks 0.486245 0.0 1.72171    
cufflinks 0.25443 0.0 0.940095    
cufflinks 0.0682513 0.0 0.267132 Low Low
cufflinks 0.634603 0.0 2.20121    
cufflinks 0.237206 0.0 0.878898    
cufflinks 0.336391 0.0 1.22232    
cufflinks 0.157        
cufflinks 0.1       Low
cufflinks 1.091       High
cufflinks 0.263        
cufflinks 0.387        
cufflinks 0.097       Low
cufflinks 0.321        
cufflinks 0.102       Low
cufflinks 0.544       High
cufflinks 0.48        
cufflinks 0.354        
cufflinks 0.062     Low Low
cufflinks 0.366        
cufflinks 0.441        
cufflinks 0.107        
cufflinks 0.315        
cufflinks 0.097       Low

0 Strain