Gene : Glyma.03G257000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Genomic Order:  2570
Name:  ? Glyma.03G257000 Secondary Identifier:  ? PAC:30518138
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G257000 0.5kb upstream 0.5kb upstream 5595 true Chr03: 45173339-45178933 Glycine max
Glyma.03G257000 0.5kb upstream 0.5kb upstream 500 false Chr03: 45173339-45173838 Glycine max
Glyma.03G257000 0.5kb downstream 0.5kb downstream 5595 true Chr03: 45173839-45179433 Glycine max
Glyma.03G257000 0.5kb downstream 0.5kb downstream 500 false Chr03: 45178934-45179433 Glycine max
Glyma.03G257000 1.0kb upstream 1.0kb upstream 6095 true Chr03: 45172839-45178933 Glycine max
Glyma.03G257000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45172839-45173838 Glycine max
Glyma.03G257000 1.0kb downstream 1.0kb downstream 6095 true Chr03: 45173839-45179933 Glycine max
Glyma.03G257000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45178934-45179933 Glycine max
Glyma.03G257000 2.0kb upstream 2.0kb upstream 7095 true Chr03: 45171839-45178933 Glycine max
Glyma.03G257000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45171839-45173838 Glycine max
Glyma.03G257000 2.0kb downstream 2.0kb downstream 7095 true Chr03: 45173839-45180933 Glycine max
Glyma.03G257000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45178934-45180933 Glycine max
Glyma.03G257000 5.0kb upstream 5.0kb upstream 10095 true Chr03: 45168839-45178933 Glycine max
Glyma.03G257000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45168839-45173838 Glycine max
Glyma.03G257000 5.0kb downstream 5.0kb downstream 10095 true Chr03: 45173839-45183933 Glycine max
Glyma.03G257000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45178934-45183933 Glycine max
Glyma.03G257000 10.0kb upstream 10.0kb upstream 15095 true Chr03: 45163839-45178933 Glycine max
Glyma.03G257000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45163839-45173838 Glycine max
Glyma.03G257000 10.0kb downstream 10.0kb downstream 15095 true Chr03: 45173839-45188933 Glycine max
Glyma.03G257000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45178934-45188933 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313450 5265 Fabidae View MSA
124050847 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8215 0.0 66.027   High
cufflinks 4.22031 0.0 15.7815    
cufflinks 4.84069 0.0 17.5315    
cufflinks 9.51032 0.0 31.9827    
cufflinks 0.320431 0.0 1.97062   Low
cufflinks 0.16598 0.0 0.805981 Low Low
cufflinks 1.0219 0.0 5.03198    
cufflinks 9.96639 0.0 37.6357    
cufflinks 1.71938 0.0 7.11381    
cufflinks 1.041        
cufflinks 0.042     Low Low
cufflinks 1.919        
cufflinks 0.065     Low  
cufflinks 0.046     Low Low
cufflinks 0.411        
cufflinks 1.245        
cufflinks 0.066     Low  
cufflinks 5.207       High
cufflinks 1.267        
cufflinks 1.696        
cufflinks 0.035     Low Low
cufflinks 2.256        
cufflinks 1.747        
cufflinks 0.075        
cufflinks 1.488        
cufflinks 0.054     Low Low

0 Strain