Gene : Glyma.03G086000 G. max Wm82.a2.v1
Defline:  (1 of 10) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  860
Name:  ? Glyma.03G086000 Secondary Identifier:  ? PAC:30515839
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G086000 0.5kb upstream 0.5kb upstream 12630 true Chr03: 25351483-25364112 Glycine max
Glyma.03G086000 0.5kb upstream 0.5kb upstream 500 false Chr03: 25363613-25364112 Glycine max
Glyma.03G086000 0.5kb downstream 0.5kb downstream 12630 true Chr03: 25350983-25363612 Glycine max
Glyma.03G086000 0.5kb downstream 0.5kb downstream 500 false Chr03: 25350983-25351482 Glycine max
Glyma.03G086000 1.0kb upstream 1.0kb upstream 13130 true Chr03: 25351483-25364612 Glycine max
Glyma.03G086000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25363613-25364612 Glycine max
Glyma.03G086000 1.0kb downstream 1.0kb downstream 13130 true Chr03: 25350483-25363612 Glycine max
Glyma.03G086000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25350483-25351482 Glycine max
Glyma.03G086000 2.0kb upstream 2.0kb upstream 14130 true Chr03: 25351483-25365612 Glycine max
Glyma.03G086000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25363613-25365612 Glycine max
Glyma.03G086000 2.0kb downstream 2.0kb downstream 14130 true Chr03: 25349483-25363612 Glycine max
Glyma.03G086000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25349483-25351482 Glycine max
Glyma.03G086000 5.0kb upstream 5.0kb upstream 17130 true Chr03: 25351483-25368612 Glycine max
Glyma.03G086000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25363613-25368612 Glycine max
Glyma.03G086000 5.0kb downstream 5.0kb downstream 17130 true Chr03: 25346483-25363612 Glycine max
Glyma.03G086000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25346483-25351482 Glycine max
Glyma.03G086000 10.0kb upstream 10.0kb upstream 22130 true Chr03: 25351483-25373612 Glycine max
Glyma.03G086000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25363613-25373612 Glycine max
Glyma.03G086000 10.0kb downstream 10.0kb downstream 22130 true Chr03: 25341483-25363612 Glycine max
Glyma.03G086000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25341483-25351482 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305336 5265 Fabidae View MSA
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79789 0.0 20.1793   High
cufflinks 1.28222 0.0 7.23829    
cufflinks 2.93666 0.0 13.6258    
cufflinks 1.01259 0.0 6.0761   Low
cufflinks 1.62738 0.0 4.97776    
cufflinks 1.07489 0.0 5.50603   Low
cufflinks 4.25773 0.0 18.1043   High
cufflinks 2.01777 0.0 9.47842    
cufflinks 2.1829 0.0 10.2436    
cufflinks 0.045     Low Low
cufflinks 0.177        
cufflinks 0.175        
cufflinks 0.044     Low Low
cufflinks 0.029     Low Low
cufflinks 0.077        
cufflinks 0.157        
cufflinks 0.179        
cufflinks 0.078     Low  
cufflinks 0.06     Low  
cufflinks 0.216        
cufflinks 0.153        
cufflinks 0.225        
cufflinks 0.214        
cufflinks 0.234       High
cufflinks 0.189        
cufflinks 0.11        

0 Strain