Gene : Glyma.03G097500 G. max Wm82.a2.v1
Defline:  (1 of 104) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  975
Name:  ? Glyma.03G097500 Secondary Identifier:  ? PAC:30516678
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G097500 0.5kb upstream 0.5kb upstream 5938 true Chr03: 28506621-28512558 Glycine max
Glyma.03G097500 0.5kb upstream 0.5kb upstream 500 false Chr03: 28512059-28512558 Glycine max
Glyma.03G097500 0.5kb downstream 0.5kb downstream 5938 true Chr03: 28506121-28512058 Glycine max
Glyma.03G097500 0.5kb downstream 0.5kb downstream 500 false Chr03: 28506121-28506620 Glycine max
Glyma.03G097500 1.0kb upstream 1.0kb upstream 6438 true Chr03: 28506621-28513058 Glycine max
Glyma.03G097500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28512059-28513058 Glycine max
Glyma.03G097500 1.0kb downstream 1.0kb downstream 6438 true Chr03: 28505621-28512058 Glycine max
Glyma.03G097500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28505621-28506620 Glycine max
Glyma.03G097500 2.0kb upstream 2.0kb upstream 7438 true Chr03: 28506621-28514058 Glycine max
Glyma.03G097500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28512059-28514058 Glycine max
Glyma.03G097500 2.0kb downstream 2.0kb downstream 7438 true Chr03: 28504621-28512058 Glycine max
Glyma.03G097500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28504621-28506620 Glycine max
Glyma.03G097500 5.0kb upstream 5.0kb upstream 10438 true Chr03: 28506621-28517058 Glycine max
Glyma.03G097500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28512059-28517058 Glycine max
Glyma.03G097500 5.0kb downstream 5.0kb downstream 10438 true Chr03: 28501621-28512058 Glycine max
Glyma.03G097500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28501621-28506620 Glycine max
Glyma.03G097500 10.0kb upstream 10.0kb upstream 15438 true Chr03: 28506621-28522058 Glycine max
Glyma.03G097500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28512059-28522058 Glycine max
Glyma.03G097500 10.0kb downstream 10.0kb downstream 15438 true Chr03: 28496621-28512058 Glycine max
Glyma.03G097500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28496621-28506620 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297857 5265 Fabidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.147939 0.0 0.58896 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain