Gene : Glyma.03G081600 G. max Wm82.a2.v1
Defline:  (1 of 28) PF04576 - Zein-binding (Zein-binding) Genomic Order:  816
Name:  ? Glyma.03G081600 Secondary Identifier:  ? PAC:30519002
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G081600 0.5kb upstream 0.5kb upstream 4411 true Chr03: 22003233-22007643 Glycine max
Glyma.03G081600 0.5kb upstream 0.5kb upstream 500 false Chr03: 22007144-22007643 Glycine max
Glyma.03G081600 0.5kb downstream 0.5kb downstream 4411 true Chr03: 22002733-22007143 Glycine max
Glyma.03G081600 0.5kb downstream 0.5kb downstream 500 false Chr03: 22002733-22003232 Glycine max
Glyma.03G081600 1.0kb upstream 1.0kb upstream 4911 true Chr03: 22003233-22008143 Glycine max
Glyma.03G081600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 22007144-22008143 Glycine max
Glyma.03G081600 1.0kb downstream 1.0kb downstream 4911 true Chr03: 22002233-22007143 Glycine max
Glyma.03G081600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 22002233-22003232 Glycine max
Glyma.03G081600 2.0kb upstream 2.0kb upstream 5911 true Chr03: 22003233-22009143 Glycine max
Glyma.03G081600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 22007144-22009143 Glycine max
Glyma.03G081600 2.0kb downstream 2.0kb downstream 5911 true Chr03: 22001233-22007143 Glycine max
Glyma.03G081600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 22001233-22003232 Glycine max
Glyma.03G081600 5.0kb upstream 5.0kb upstream 8911 true Chr03: 22003233-22012143 Glycine max
Glyma.03G081600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 22007144-22012143 Glycine max
Glyma.03G081600 5.0kb downstream 5.0kb downstream 8911 true Chr03: 21998233-22007143 Glycine max
Glyma.03G081600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21998233-22003232 Glycine max
Glyma.03G081600 10.0kb upstream 10.0kb upstream 13911 true Chr03: 22003233-22017143 Glycine max
Glyma.03G081600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 22007144-22017143 Glycine max
Glyma.03G081600 10.0kb downstream 10.0kb downstream 13911 true Chr03: 21993233-22007143 Glycine max
Glyma.03G081600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21993233-22003232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311064 5265 Fabidae View MSA
124068761 5270 Rosid View MSA
123746537 5271 Pentapetalae View MSA
122795309 5272 Eudicot View MSA
122048719 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.96568 0.0 18.8841    
cufflinks 3.79501 0.0 13.3878    
cufflinks 5.39836 0.0 17.4549    
cufflinks 4.42563 0.0 17.5835    
cufflinks 2.64825 0.0 12.4427   Low
cufflinks 5.00708 0.0 16.0827    
cufflinks 7.55384 0.0 23.7488   High
cufflinks 2.79179 0.0 12.5985   Low
cufflinks 3.77811 0.0 13.4213    
cufflinks 0.799       Low
cufflinks 1.912       High
cufflinks 1.853       High
cufflinks 1.138        
cufflinks 1.168        
cufflinks 0.997        
cufflinks 1.044        
cufflinks 0.926       Low
cufflinks 2.613       High
cufflinks 1.812        
cufflinks 1.103        
cufflinks 1.077        
cufflinks 1.278        
cufflinks 1.447        
cufflinks 1.989       High
cufflinks 1.168        
cufflinks 1.379        

0 Strain