Gene : Glyma.03G064400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  644
Name:  ? Glyma.03G064400 Secondary Identifier:  ? PAC:30516816
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G064400 0.5kb upstream 0.5kb upstream 6179 true Chr03: 10601129-10607307 Glycine max
Glyma.03G064400 0.5kb upstream 0.5kb upstream 500 false Chr03: 10601129-10601628 Glycine max
Glyma.03G064400 0.5kb downstream 0.5kb downstream 6179 true Chr03: 10601629-10607807 Glycine max
Glyma.03G064400 0.5kb downstream 0.5kb downstream 500 false Chr03: 10607308-10607807 Glycine max
Glyma.03G064400 1.0kb upstream 1.0kb upstream 6679 true Chr03: 10600629-10607307 Glycine max
Glyma.03G064400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10600629-10601628 Glycine max
Glyma.03G064400 1.0kb downstream 1.0kb downstream 6679 true Chr03: 10601629-10608307 Glycine max
Glyma.03G064400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10607308-10608307 Glycine max
Glyma.03G064400 2.0kb upstream 2.0kb upstream 7679 true Chr03: 10599629-10607307 Glycine max
Glyma.03G064400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10599629-10601628 Glycine max
Glyma.03G064400 2.0kb downstream 2.0kb downstream 7679 true Chr03: 10601629-10609307 Glycine max
Glyma.03G064400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10607308-10609307 Glycine max
Glyma.03G064400 5.0kb upstream 5.0kb upstream 10679 true Chr03: 10596629-10607307 Glycine max
Glyma.03G064400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10596629-10601628 Glycine max
Glyma.03G064400 5.0kb downstream 5.0kb downstream 10679 true Chr03: 10601629-10612307 Glycine max
Glyma.03G064400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10607308-10612307 Glycine max
Glyma.03G064400 10.0kb upstream 10.0kb upstream 15679 true Chr03: 10591629-10607307 Glycine max
Glyma.03G064400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10591629-10601628 Glycine max
Glyma.03G064400 10.0kb downstream 10.0kb downstream 15679 true Chr03: 10601629-10617307 Glycine max
Glyma.03G064400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10607308-10617307 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302034 5265 Fabidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74992 0.0 13.4027    
cufflinks 4.93252 0.0 16.3091    
cufflinks 3.00145 0.0 11.3219   Low
cufflinks 6.72978 0.0 21.1518   High
cufflinks 6.60799 0.0 20.8458   High
cufflinks 4.24547 0.0 14.7853    
cufflinks 6.60922 0.0 20.9214   High
cufflinks 4.14915 0.0 14.4074    
cufflinks 5.42826 0.0 17.7576    
cufflinks 2.389        
cufflinks 0.215       Low
cufflinks 2.434        
cufflinks 3.447        
cufflinks 4.442       High
cufflinks 0.68        
cufflinks 1.605        
cufflinks 0.924        
cufflinks 3.899       High
cufflinks 3.025        
cufflinks 1.854        
cufflinks 0.347       Low
cufflinks 2.0        
cufflinks 1.977        
cufflinks 0.264       Low
cufflinks 1.83        
cufflinks 0.892        

0 Strain