Gene : Glyma.03G105000 G. max Wm82.a2.v1
Defline:  (1 of 22) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS Genomic Order:  1050
Name:  ? Glyma.03G105000 Secondary Identifier:  ? PAC:30515518
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G105000 0.5kb upstream 0.5kb upstream 9445 true Chr03: 30022694-30032138 Glycine max
Glyma.03G105000 0.5kb upstream 0.5kb upstream 500 false Chr03: 30022694-30023193 Glycine max
Glyma.03G105000 0.5kb downstream 0.5kb downstream 9445 true Chr03: 30023194-30032638 Glycine max
Glyma.03G105000 0.5kb downstream 0.5kb downstream 500 false Chr03: 30032139-30032638 Glycine max
Glyma.03G105000 1.0kb upstream 1.0kb upstream 9945 true Chr03: 30022194-30032138 Glycine max
Glyma.03G105000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30022194-30023193 Glycine max
Glyma.03G105000 1.0kb downstream 1.0kb downstream 9945 true Chr03: 30023194-30033138 Glycine max
Glyma.03G105000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30032139-30033138 Glycine max
Glyma.03G105000 2.0kb upstream 2.0kb upstream 10945 true Chr03: 30021194-30032138 Glycine max
Glyma.03G105000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30021194-30023193 Glycine max
Glyma.03G105000 2.0kb downstream 2.0kb downstream 10945 true Chr03: 30023194-30034138 Glycine max
Glyma.03G105000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30032139-30034138 Glycine max
Glyma.03G105000 5.0kb upstream 5.0kb upstream 13945 true Chr03: 30018194-30032138 Glycine max
Glyma.03G105000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30018194-30023193 Glycine max
Glyma.03G105000 5.0kb downstream 5.0kb downstream 13945 true Chr03: 30023194-30037138 Glycine max
Glyma.03G105000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30032139-30037138 Glycine max
Glyma.03G105000 10.0kb upstream 10.0kb upstream 18945 true Chr03: 30013194-30032138 Glycine max
Glyma.03G105000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30013194-30023193 Glycine max
Glyma.03G105000 10.0kb downstream 10.0kb downstream 18945 true Chr03: 30023194-30042138 Glycine max
Glyma.03G105000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30032139-30042138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296971 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.579149 0.0 3.83078    
cufflinks 7.11717 0.0 32.8244   High
cufflinks 2.30927 0.0 15.2988    
cufflinks 13.1501 0.0 57.3102   High
cufflinks 0.218758 0.0 1.59255 Low  
cufflinks 0.268796 0.0 1.3404 Low  
cufflinks 0.335208 0.0 1.31158    
cufflinks 0.318045 0.0 2.18365    
cufflinks 0.550686 0.0 4.82131    
cufflinks 0.083     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.418        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.124        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.624       High
cufflinks 0.634       High
cufflinks 0.086     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.097     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.133        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain