Gene : Glyma.19G063600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Genomic Order:  636
Name:  ? Glyma.19G063600 Secondary Identifier:  ? PAC:30514409
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G063600 0.5kb upstream 0.5kb upstream 2899 true Chr19: 14053828-14056726 Glycine max
Glyma.19G063600 0.5kb upstream 0.5kb upstream 500 false Chr19: 14056227-14056726 Glycine max
Glyma.19G063600 0.5kb downstream 0.5kb downstream 2899 true Chr19: 14053328-14056226 Glycine max
Glyma.19G063600 0.5kb downstream 0.5kb downstream 500 false Chr19: 14053328-14053827 Glycine max
Glyma.19G063600 1.0kb upstream 1.0kb upstream 3399 true Chr19: 14053828-14057226 Glycine max
Glyma.19G063600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 14056227-14057226 Glycine max
Glyma.19G063600 1.0kb downstream 1.0kb downstream 3399 true Chr19: 14052828-14056226 Glycine max
Glyma.19G063600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 14052828-14053827 Glycine max
Glyma.19G063600 2.0kb upstream 2.0kb upstream 4399 true Chr19: 14053828-14058226 Glycine max
Glyma.19G063600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 14056227-14058226 Glycine max
Glyma.19G063600 2.0kb downstream 2.0kb downstream 4399 true Chr19: 14051828-14056226 Glycine max
Glyma.19G063600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 14051828-14053827 Glycine max
Glyma.19G063600 5.0kb upstream 5.0kb upstream 7399 true Chr19: 14053828-14061226 Glycine max
Glyma.19G063600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 14056227-14061226 Glycine max
Glyma.19G063600 5.0kb downstream 5.0kb downstream 7399 true Chr19: 14048828-14056226 Glycine max
Glyma.19G063600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 14048828-14053827 Glycine max
Glyma.19G063600 10.0kb upstream 10.0kb upstream 12399 true Chr19: 14053828-14066226 Glycine max
Glyma.19G063600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 14056227-14066226 Glycine max
Glyma.19G063600 10.0kb downstream 10.0kb downstream 12399 true Chr19: 14043828-14056226 Glycine max
Glyma.19G063600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 14043828-14053827 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314888 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584621 0.0 5.27036    
cufflinks 9.52721 0.0 36.2315   High
cufflinks 2.29622 0.0 13.2813    
cufflinks 0.68062 0.0 4.76637    
cufflinks 0.506807 0.0 3.11677    
cufflinks 0.869788 0.0 4.83073    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.6744 0.0 38.922   High
cufflinks 0.34143 0.0 1.67491   Low
cufflinks 0.082     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.405        
cufflinks 0.022     Low  
cufflinks 0.132        
cufflinks 0.005     Low Low
cufflinks 2.035       High
cufflinks 0.013     Low  
cufflinks 0.524        
cufflinks 0.052     Low  
cufflinks 0.314        
cufflinks 0.014     Low  
cufflinks 0.726       High
cufflinks 0.057     Low  
cufflinks 0.008     Low Low
cufflinks 1.668       High
cufflinks 0.013     Low  

0 Strain