Gene : Glyma.03G100700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21192 - NUCLEAR PROTEIN E3-3 Genomic Order:  1007
Name:  ? Glyma.03G100700 Secondary Identifier:  ? PAC:30516257
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G100700 0.5kb upstream 0.5kb upstream 4687 true Chr03: 28972740-28977426 Glycine max
Glyma.03G100700 0.5kb upstream 0.5kb upstream 500 false Chr03: 28972740-28973239 Glycine max
Glyma.03G100700 0.5kb downstream 0.5kb downstream 4687 true Chr03: 28973240-28977926 Glycine max
Glyma.03G100700 0.5kb downstream 0.5kb downstream 500 false Chr03: 28977427-28977926 Glycine max
Glyma.03G100700 1.0kb upstream 1.0kb upstream 5187 true Chr03: 28972240-28977426 Glycine max
Glyma.03G100700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28972240-28973239 Glycine max
Glyma.03G100700 1.0kb downstream 1.0kb downstream 5187 true Chr03: 28973240-28978426 Glycine max
Glyma.03G100700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28977427-28978426 Glycine max
Glyma.03G100700 2.0kb upstream 2.0kb upstream 6187 true Chr03: 28971240-28977426 Glycine max
Glyma.03G100700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28971240-28973239 Glycine max
Glyma.03G100700 2.0kb downstream 2.0kb downstream 6187 true Chr03: 28973240-28979426 Glycine max
Glyma.03G100700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28977427-28979426 Glycine max
Glyma.03G100700 5.0kb upstream 5.0kb upstream 9187 true Chr03: 28968240-28977426 Glycine max
Glyma.03G100700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28968240-28973239 Glycine max
Glyma.03G100700 5.0kb downstream 5.0kb downstream 9187 true Chr03: 28973240-28982426 Glycine max
Glyma.03G100700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28977427-28982426 Glycine max
Glyma.03G100700 10.0kb upstream 10.0kb upstream 14187 true Chr03: 28963240-28977426 Glycine max
Glyma.03G100700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28963240-28973239 Glycine max
Glyma.03G100700 10.0kb downstream 10.0kb downstream 14187 true Chr03: 28973240-28987426 Glycine max
Glyma.03G100700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28977427-28987426 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026335 5273 Angiosperm View MSA
122312393 5265 Fabidae View MSA
124064435 5270 Rosid View MSA
123737583 5271 Pentapetalae View MSA
122789794 5272 Eudicot View MSA
121344715 5274 Embryophyte View MSA
123423975 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.8867 0.0 96.2617 High High
cufflinks 14.1072 0.0 59.4394   Low
cufflinks 22.8723 0.0 87.5888 High High
cufflinks 15.5294 0.0 61.7307    
cufflinks 20.7216 0.0 81.0844 High  
cufflinks 18.9162 0.0 73.0159    
cufflinks 16.6311 0.0 57.66    
cufflinks 15.7093 0.0 62.6821    
cufflinks 18.4805 0.0 71.0792    
cufflinks 1.64        
cufflinks 2.058        
cufflinks 2.157        
cufflinks 2.31        
cufflinks 3.188       High
cufflinks 1.659        
cufflinks 1.342       Low
cufflinks 1.348       Low
cufflinks 1.778        
cufflinks 1.651        
cufflinks 1.321       Low
cufflinks 2.247        
cufflinks 1.285       Low
cufflinks 1.455        
cufflinks 2.592       High
cufflinks 1.404        
cufflinks 1.881        

0 Strain