Gene : Glyma.03G110100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10746:SF10 - 50S RIBOSOMAL PROTEIN L4, CHLOROPLASTIC Genomic Order:  1101
Name:  ? Glyma.03G110100 Secondary Identifier:  ? PAC:30515401
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G110100 0.5kb upstream 0.5kb upstream 3569 true Chr03: 31375235-31378803 Glycine max
Glyma.03G110100 0.5kb upstream 0.5kb upstream 500 false Chr03: 31378304-31378803 Glycine max
Glyma.03G110100 0.5kb downstream 0.5kb downstream 3569 true Chr03: 31374735-31378303 Glycine max
Glyma.03G110100 0.5kb downstream 0.5kb downstream 500 false Chr03: 31374735-31375234 Glycine max
Glyma.03G110100 1.0kb upstream 1.0kb upstream 4069 true Chr03: 31375235-31379303 Glycine max
Glyma.03G110100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31378304-31379303 Glycine max
Glyma.03G110100 1.0kb downstream 1.0kb downstream 4069 true Chr03: 31374235-31378303 Glycine max
Glyma.03G110100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31374235-31375234 Glycine max
Glyma.03G110100 2.0kb upstream 2.0kb upstream 5069 true Chr03: 31375235-31380303 Glycine max
Glyma.03G110100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31378304-31380303 Glycine max
Glyma.03G110100 2.0kb downstream 2.0kb downstream 5069 true Chr03: 31373235-31378303 Glycine max
Glyma.03G110100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31373235-31375234 Glycine max
Glyma.03G110100 5.0kb upstream 5.0kb upstream 8069 true Chr03: 31375235-31383303 Glycine max
Glyma.03G110100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31378304-31383303 Glycine max
Glyma.03G110100 5.0kb downstream 5.0kb downstream 8069 true Chr03: 31370235-31378303 Glycine max
Glyma.03G110100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31370235-31375234 Glycine max
Glyma.03G110100 10.0kb upstream 10.0kb upstream 13069 true Chr03: 31375235-31388303 Glycine max
Glyma.03G110100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31378304-31388303 Glycine max
Glyma.03G110100 10.0kb downstream 10.0kb downstream 13069 true Chr03: 31365235-31378303 Glycine max
Glyma.03G110100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31365235-31375234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306139 5265 Fabidae View MSA
124063148 5270 Rosid View MSA
123747549 5271 Pentapetalae View MSA
122789714 5272 Eudicot View MSA
122046964 5273 Angiosperm View MSA
121346297 5274 Embryophyte View MSA
123427299 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6953 0.0 71.5781 High High
cufflinks 29.8884 0.0 80.3907 High High
cufflinks 13.461 0.0 36.2532    
cufflinks 12.2161 0.0 33.001    
cufflinks 7.29099 0.0 20.3527    
cufflinks 6.9733 0.0 19.6068    
cufflinks 8.07937 0.0 22.3811    
cufflinks 11.8296 0.0 32.0042    
cufflinks 5.3475 0.0 15.5192   Low
cufflinks 8.644     High  
cufflinks 2.022        
cufflinks 5.827        
cufflinks 1.271       Low
cufflinks 1.044       Low
cufflinks 3.894        
cufflinks 48.612     High High
cufflinks 1.253       Low
cufflinks 5.191        
cufflinks 13.504     High  
cufflinks 57.111     High High
cufflinks 2.241        
cufflinks 45.834     High High
cufflinks 34.961     High High
cufflinks 1.716        
cufflinks 49.559     High High
cufflinks 1.614        

0 Strain