Gene : Glyma.03G109200 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3392 - Exon-exon junction complex, Magoh component Genomic Order:  1092
Name:  ? Glyma.03G109200 Secondary Identifier:  ? PAC:30516545
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G109200 0.5kb upstream 0.5kb upstream 3632 true Chr03: 31070936-31074567 Glycine max
Glyma.03G109200 0.5kb upstream 0.5kb upstream 500 false Chr03: 31070936-31071435 Glycine max
Glyma.03G109200 0.5kb downstream 0.5kb downstream 3632 true Chr03: 31071436-31075067 Glycine max
Glyma.03G109200 0.5kb downstream 0.5kb downstream 500 false Chr03: 31074568-31075067 Glycine max
Glyma.03G109200 1.0kb upstream 1.0kb upstream 4132 true Chr03: 31070436-31074567 Glycine max
Glyma.03G109200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 31070436-31071435 Glycine max
Glyma.03G109200 1.0kb downstream 1.0kb downstream 4132 true Chr03: 31071436-31075567 Glycine max
Glyma.03G109200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 31074568-31075567 Glycine max
Glyma.03G109200 2.0kb upstream 2.0kb upstream 5132 true Chr03: 31069436-31074567 Glycine max
Glyma.03G109200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 31069436-31071435 Glycine max
Glyma.03G109200 2.0kb downstream 2.0kb downstream 5132 true Chr03: 31071436-31076567 Glycine max
Glyma.03G109200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 31074568-31076567 Glycine max
Glyma.03G109200 5.0kb upstream 5.0kb upstream 8132 true Chr03: 31066436-31074567 Glycine max
Glyma.03G109200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 31066436-31071435 Glycine max
Glyma.03G109200 5.0kb downstream 5.0kb downstream 8132 true Chr03: 31071436-31079567 Glycine max
Glyma.03G109200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 31074568-31079567 Glycine max
Glyma.03G109200 10.0kb upstream 10.0kb upstream 13132 true Chr03: 31061436-31074567 Glycine max
Glyma.03G109200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 31061436-31071435 Glycine max
Glyma.03G109200 10.0kb downstream 10.0kb downstream 13132 true Chr03: 31071436-31084567 Glycine max
Glyma.03G109200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 31074568-31084567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245522 5265 Fabidae Singleton cluster - no MSA
124066056 5270 Rosid View MSA
123753775 5271 Pentapetalae View MSA
122786984 5272 Eudicot View MSA
122044981 5273 Angiosperm View MSA
121347461 5274 Embryophyte View MSA
123426224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.1539 0.0 254.742 High Low
cufflinks 107.05 0.0 415.488 High  
cufflinks 71.818 0.0 264.511 High  
cufflinks 66.3896 0.0 244.185 High Low
cufflinks 96.4822 0.0 373.549 High  
cufflinks 117.134 0.0 472.556 High High
cufflinks 117.44 0.0 468.041 High High
cufflinks 84.4616 0.0 323.947 High  
cufflinks 80.4947 0.0 302.542 High  
cufflinks 4.228        
cufflinks 3.888        
cufflinks 3.825        
cufflinks 5.141       High
cufflinks 5.97       High
cufflinks 2.836       Low
cufflinks 4.094        
cufflinks 3.513        
cufflinks 4.204        
cufflinks 5.793       High
cufflinks 3.647        
cufflinks 3.968        
cufflinks 3.954        
cufflinks 3.819        
cufflinks 4.037        
cufflinks 3.85        
cufflinks 4.062        

0 Strain