Gene : Glyma.03G107300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11937:SF235 - ACTIN-LIKE PROTEIN 6A Genomic Order:  1073
Name:  ? Glyma.03G107300 Secondary Identifier:  ? PAC:30518174
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G107300 0.5kb upstream 0.5kb upstream 17888 true Chr03: 30702594-30720481 Glycine max
Glyma.03G107300 0.5kb upstream 0.5kb upstream 500 false Chr03: 30702594-30703093 Glycine max
Glyma.03G107300 0.5kb downstream 0.5kb downstream 17888 true Chr03: 30703094-30720981 Glycine max
Glyma.03G107300 0.5kb downstream 0.5kb downstream 500 false Chr03: 30720482-30720981 Glycine max
Glyma.03G107300 1.0kb upstream 1.0kb upstream 18388 true Chr03: 30702094-30720481 Glycine max
Glyma.03G107300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 30702094-30703093 Glycine max
Glyma.03G107300 1.0kb downstream 1.0kb downstream 18388 true Chr03: 30703094-30721481 Glycine max
Glyma.03G107300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 30720482-30721481 Glycine max
Glyma.03G107300 2.0kb upstream 2.0kb upstream 19388 true Chr03: 30701094-30720481 Glycine max
Glyma.03G107300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 30701094-30703093 Glycine max
Glyma.03G107300 2.0kb downstream 2.0kb downstream 19388 true Chr03: 30703094-30722481 Glycine max
Glyma.03G107300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 30720482-30722481 Glycine max
Glyma.03G107300 5.0kb upstream 5.0kb upstream 22388 true Chr03: 30698094-30720481 Glycine max
Glyma.03G107300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 30698094-30703093 Glycine max
Glyma.03G107300 5.0kb downstream 5.0kb downstream 22388 true Chr03: 30703094-30725481 Glycine max
Glyma.03G107300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 30720482-30725481 Glycine max
Glyma.03G107300 10.0kb upstream 10.0kb upstream 27388 true Chr03: 30693094-30720481 Glycine max
Glyma.03G107300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 30693094-30703093 Glycine max
Glyma.03G107300 10.0kb downstream 10.0kb downstream 27388 true Chr03: 30703094-30730481 Glycine max
Glyma.03G107300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 30720482-30730481 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300268 5265 Fabidae View MSA
124063804 5270 Rosid View MSA
123743517 5271 Pentapetalae View MSA
122788412 5272 Eudicot View MSA
122043885 5273 Angiosperm View MSA
121347268 5274 Embryophyte View MSA
123426556 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8115 0.0 31.6993    
cufflinks 18.5645 0.0 49.5622   High
cufflinks 13.2078 0.0 35.3072    
cufflinks 9.65122 0.0 26.1235    
cufflinks 10.3834 0.0 28.0214    
cufflinks 8.77985 0.0 23.9041    
cufflinks 9.38201 0.0 25.4703    
cufflinks 9.19352 0.0 24.949    
cufflinks 10.9031 0.0 29.3429    
cufflinks 0.436       Low
cufflinks 0.532       Low
cufflinks 0.831        
cufflinks 0.681        
cufflinks 0.767        
cufflinks 0.683        
cufflinks 1.216       High
cufflinks 0.527       Low
cufflinks 0.833        
cufflinks 1.216       High
cufflinks 1.18       High
cufflinks 0.605        
cufflinks 1.233       High
cufflinks 1.245       High
cufflinks 0.653        
cufflinks 1.153       High
cufflinks 0.634        

0 Strain