Gene : Glyma.03G121300 G. max Wm82.a2.v1
Defline:  (1 of 8) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  1213
Name:  ? Glyma.03G121300 Secondary Identifier:  ? PAC:30516527
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5203 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G121300 0.5kb upstream 0.5kb upstream 24846 true Chr03: 33331068-33355913 Glycine max
Glyma.03G121300 0.5kb upstream 0.5kb upstream 500 false Chr03: 33355414-33355913 Glycine max
Glyma.03G121300 0.5kb downstream 0.5kb downstream 24846 true Chr03: 33330568-33355413 Glycine max
Glyma.03G121300 0.5kb downstream 0.5kb downstream 500 false Chr03: 33330568-33331067 Glycine max
Glyma.03G121300 1.0kb upstream 1.0kb upstream 25346 true Chr03: 33331068-33356413 Glycine max
Glyma.03G121300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33355414-33356413 Glycine max
Glyma.03G121300 1.0kb downstream 1.0kb downstream 25346 true Chr03: 33330068-33355413 Glycine max
Glyma.03G121300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33330068-33331067 Glycine max
Glyma.03G121300 2.0kb upstream 2.0kb upstream 26346 true Chr03: 33331068-33357413 Glycine max
Glyma.03G121300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33355414-33357413 Glycine max
Glyma.03G121300 2.0kb downstream 2.0kb downstream 26346 true Chr03: 33329068-33355413 Glycine max
Glyma.03G121300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33329068-33331067 Glycine max
Glyma.03G121300 5.0kb upstream 5.0kb upstream 29346 true Chr03: 33331068-33360413 Glycine max
Glyma.03G121300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33355414-33360413 Glycine max
Glyma.03G121300 5.0kb downstream 5.0kb downstream 29346 true Chr03: 33326068-33355413 Glycine max
Glyma.03G121300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33326068-33331067 Glycine max
Glyma.03G121300 10.0kb upstream 10.0kb upstream 34346 true Chr03: 33331068-33365413 Glycine max
Glyma.03G121300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33355414-33365413 Glycine max
Glyma.03G121300 10.0kb downstream 10.0kb downstream 34346 true Chr03: 33321068-33355413 Glycine max
Glyma.03G121300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33321068-33331067 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122315387 5265 Fabidae View MSA
124075304 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.39248 0.0 9.45842    
cufflinks 0.480293 0.0 2.82108    
cufflinks 3.55953 0.0 14.6078    
cufflinks 5.41304 0.0 19.8513   High
cufflinks 0.0777343 0.0 0.306882 Low Low
cufflinks 0.147494 0.0 0.746763 Low  
cufflinks 1.56566 0.0 7.0304    
cufflinks 0.734719 0.0 4.13602    
cufflinks 0.0164299 0.0 0.0720479 Low Low
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.268       High
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.006     Low  
cufflinks 0.071     Low High
cufflinks 0.014     Low  
cufflinks 0.006     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.01     Low  
cufflinks 0.003     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low Low

0 Strain