Gene : Glyma.03G121600 G. max Wm82.a2.v1
Defline:  (1 of 8) 5.4.99.39 - Beta-amyrin synthase / 2,3-oxidosqualene beta-amyrin cyclase Genomic Order:  1216
Name:  ? Glyma.03G121600 Secondary Identifier:  ? PAC:30517632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5203 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G121600 0.5kb upstream 0.5kb upstream 2736 true Chr03: 33418557-33421292 Glycine max
Glyma.03G121600 0.5kb upstream 0.5kb upstream 500 false Chr03: 33420793-33421292 Glycine max
Glyma.03G121600 0.5kb downstream 0.5kb downstream 2736 true Chr03: 33418057-33420792 Glycine max
Glyma.03G121600 0.5kb downstream 0.5kb downstream 500 false Chr03: 33418057-33418556 Glycine max
Glyma.03G121600 1.0kb upstream 1.0kb upstream 3236 true Chr03: 33418557-33421792 Glycine max
Glyma.03G121600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33420793-33421792 Glycine max
Glyma.03G121600 1.0kb downstream 1.0kb downstream 3236 true Chr03: 33417557-33420792 Glycine max
Glyma.03G121600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33417557-33418556 Glycine max
Glyma.03G121600 2.0kb upstream 2.0kb upstream 4236 true Chr03: 33418557-33422792 Glycine max
Glyma.03G121600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33420793-33422792 Glycine max
Glyma.03G121600 2.0kb downstream 2.0kb downstream 4236 true Chr03: 33416557-33420792 Glycine max
Glyma.03G121600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33416557-33418556 Glycine max
Glyma.03G121600 5.0kb upstream 5.0kb upstream 7236 true Chr03: 33418557-33425792 Glycine max
Glyma.03G121600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33420793-33425792 Glycine max
Glyma.03G121600 5.0kb downstream 5.0kb downstream 7236 true Chr03: 33413557-33420792 Glycine max
Glyma.03G121600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33413557-33418556 Glycine max
Glyma.03G121600 10.0kb upstream 10.0kb upstream 12236 true Chr03: 33418557-33430792 Glycine max
Glyma.03G121600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33420793-33430792 Glycine max
Glyma.03G121600 10.0kb downstream 10.0kb downstream 12236 true Chr03: 33408557-33420792 Glycine max
Glyma.03G121600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33408557-33418556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029665 5273 Angiosperm View MSA
122314492 5265 Fabidae View MSA
124074918 5270 Rosid View MSA
123750471 5271 Pentapetalae View MSA
122795887 5272 Eudicot View MSA
121298968 5274 Embryophyte View MSA
123336900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.14921 0.0 4.32414    
cufflinks 7.48012 0.0 24.2149    
cufflinks 2.73299 0.0 9.77662    
cufflinks 14.5649 0.0 42.7267   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.230524 0.0 0.925427 Low Low
cufflinks 3.75712 0.0 13.1771    
cufflinks 1.40441 0.0 5.23163    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.106       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.525       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.251        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.085       Low
cufflinks 5.098        
cufflinks 3.822        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.541        
cufflinks 5.827       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.344        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain