Gene : Glyma.03G123300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR15672:SF15 - EXPRESSED PROTEIN Genomic Order:  1233
Name:  ? Glyma.03G123300 Secondary Identifier:  ? PAC:30516385
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G123300 0.5kb upstream 0.5kb upstream 4589 true Chr03: 33625507-33630095 Glycine max
Glyma.03G123300 0.5kb upstream 0.5kb upstream 500 false Chr03: 33625507-33626006 Glycine max
Glyma.03G123300 0.5kb downstream 0.5kb downstream 4589 true Chr03: 33626007-33630595 Glycine max
Glyma.03G123300 0.5kb downstream 0.5kb downstream 500 false Chr03: 33630096-33630595 Glycine max
Glyma.03G123300 1.0kb upstream 1.0kb upstream 5089 true Chr03: 33625007-33630095 Glycine max
Glyma.03G123300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33625007-33626006 Glycine max
Glyma.03G123300 1.0kb downstream 1.0kb downstream 5089 true Chr03: 33626007-33631095 Glycine max
Glyma.03G123300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33630096-33631095 Glycine max
Glyma.03G123300 2.0kb upstream 2.0kb upstream 6089 true Chr03: 33624007-33630095 Glycine max
Glyma.03G123300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33624007-33626006 Glycine max
Glyma.03G123300 2.0kb downstream 2.0kb downstream 6089 true Chr03: 33626007-33632095 Glycine max
Glyma.03G123300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33630096-33632095 Glycine max
Glyma.03G123300 5.0kb upstream 5.0kb upstream 9089 true Chr03: 33621007-33630095 Glycine max
Glyma.03G123300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33621007-33626006 Glycine max
Glyma.03G123300 5.0kb downstream 5.0kb downstream 9089 true Chr03: 33626007-33635095 Glycine max
Glyma.03G123300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33630096-33635095 Glycine max
Glyma.03G123300 10.0kb upstream 10.0kb upstream 14089 true Chr03: 33616007-33630095 Glycine max
Glyma.03G123300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33616007-33626006 Glycine max
Glyma.03G123300 10.0kb downstream 10.0kb downstream 14089 true Chr03: 33626007-33640095 Glycine max
Glyma.03G123300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33630096-33640095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299184 5265 Fabidae View MSA
124070671 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 73.3626 0.0 322.03 High High
cufflinks 53.0053 0.0 211.62 High  
cufflinks 83.2559 0.0 386.446 High High
cufflinks 57.9505 0.0 241.691 High  
cufflinks 44.4923 0.0 170.216 High  
cufflinks 32.3865 0.0 118.853 High Low
cufflinks 43.36 0.0 182.526 High  
cufflinks 39.5138 0.0 165.606 High  
cufflinks 50.6508 0.0 199.964 High  
cufflinks 8.11     High  
cufflinks 21.932     High High
cufflinks 10.227     High  
cufflinks 3.46       Low
cufflinks 3.555       Low
cufflinks 8.788     High  
cufflinks 10.812     High  
cufflinks 10.458     High  
cufflinks 8.085     High  
cufflinks 6.417        
cufflinks 15.378     High  
cufflinks 13.311     High  
cufflinks 12.856     High  
cufflinks 9.523     High  
cufflinks 15.051     High  
cufflinks 12.608     High  
cufflinks 9.961     High  

0 Strain