Gene : Glyma.03G124700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Genomic Order:  1247
Name:  ? Glyma.03G124700 Secondary Identifier:  ? PAC:30517993
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G124700 0.5kb upstream 0.5kb upstream 4817 true Chr03: 33776174-33780990 Glycine max
Glyma.03G124700 0.5kb upstream 0.5kb upstream 500 false Chr03: 33780491-33780990 Glycine max
Glyma.03G124700 0.5kb downstream 0.5kb downstream 4817 true Chr03: 33775674-33780490 Glycine max
Glyma.03G124700 0.5kb downstream 0.5kb downstream 500 false Chr03: 33775674-33776173 Glycine max
Glyma.03G124700 1.0kb upstream 1.0kb upstream 5317 true Chr03: 33776174-33781490 Glycine max
Glyma.03G124700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33780491-33781490 Glycine max
Glyma.03G124700 1.0kb downstream 1.0kb downstream 5317 true Chr03: 33775174-33780490 Glycine max
Glyma.03G124700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33775174-33776173 Glycine max
Glyma.03G124700 2.0kb upstream 2.0kb upstream 6317 true Chr03: 33776174-33782490 Glycine max
Glyma.03G124700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33780491-33782490 Glycine max
Glyma.03G124700 2.0kb downstream 2.0kb downstream 6317 true Chr03: 33774174-33780490 Glycine max
Glyma.03G124700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33774174-33776173 Glycine max
Glyma.03G124700 5.0kb upstream 5.0kb upstream 9317 true Chr03: 33776174-33785490 Glycine max
Glyma.03G124700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33780491-33785490 Glycine max
Glyma.03G124700 5.0kb downstream 5.0kb downstream 9317 true Chr03: 33771174-33780490 Glycine max
Glyma.03G124700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33771174-33776173 Glycine max
Glyma.03G124700 10.0kb upstream 10.0kb upstream 14317 true Chr03: 33776174-33790490 Glycine max
Glyma.03G124700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33780491-33790490 Glycine max
Glyma.03G124700 10.0kb downstream 10.0kb downstream 14317 true Chr03: 33766174-33780490 Glycine max
Glyma.03G124700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33766174-33776173 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299503 5265 Fabidae View MSA
124062245 5270 Rosid View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.294 0.0 16.5075    
cufflinks 4.14881 0.0 16.1156    
cufflinks 15.908 0.0 61.4617   High
cufflinks 2.49706 0.0 9.31207   Low
cufflinks 6.33178 0.0 25.3586    
cufflinks 9.59447 0.0 32.6778    
cufflinks 2.87432 0.0 10.3806   Low
cufflinks 4.20371 0.0 16.0989    
cufflinks 10.1127 0.0 38.5821    
cufflinks 3.9        
cufflinks 10.83     High High
cufflinks 5.221        
cufflinks 1.787        
cufflinks 1.09       Low
cufflinks 12.633     High High
cufflinks 2.197        
cufflinks 16.49     High High
cufflinks 2.276        
cufflinks 1.725        
cufflinks 2.086        
cufflinks 10.336     High High
cufflinks 1.913        
cufflinks 2.933        
cufflinks 8.344     High  
cufflinks 2.603        
cufflinks 14.971     High High

0 Strain