Gene : Glyma.03G120900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  1209
Name:  ? Glyma.03G120900 Secondary Identifier:  ? PAC:30518599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G120900 0.5kb upstream 0.5kb upstream 2794 true Chr03: 33269899-33272692 Glycine max
Glyma.03G120900 0.5kb upstream 0.5kb upstream 500 false Chr03: 33272193-33272692 Glycine max
Glyma.03G120900 0.5kb downstream 0.5kb downstream 2794 true Chr03: 33269399-33272192 Glycine max
Glyma.03G120900 0.5kb downstream 0.5kb downstream 500 false Chr03: 33269399-33269898 Glycine max
Glyma.03G120900 1.0kb upstream 1.0kb upstream 3294 true Chr03: 33269899-33273192 Glycine max
Glyma.03G120900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 33272193-33273192 Glycine max
Glyma.03G120900 1.0kb downstream 1.0kb downstream 3294 true Chr03: 33268899-33272192 Glycine max
Glyma.03G120900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 33268899-33269898 Glycine max
Glyma.03G120900 2.0kb upstream 2.0kb upstream 4294 true Chr03: 33269899-33274192 Glycine max
Glyma.03G120900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 33272193-33274192 Glycine max
Glyma.03G120900 2.0kb downstream 2.0kb downstream 4294 true Chr03: 33267899-33272192 Glycine max
Glyma.03G120900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 33267899-33269898 Glycine max
Glyma.03G120900 5.0kb upstream 5.0kb upstream 7294 true Chr03: 33269899-33277192 Glycine max
Glyma.03G120900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 33272193-33277192 Glycine max
Glyma.03G120900 5.0kb downstream 5.0kb downstream 7294 true Chr03: 33264899-33272192 Glycine max
Glyma.03G120900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 33264899-33269898 Glycine max
Glyma.03G120900 10.0kb upstream 10.0kb upstream 12294 true Chr03: 33269899-33282192 Glycine max
Glyma.03G120900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 33272193-33282192 Glycine max
Glyma.03G120900 10.0kb downstream 10.0kb downstream 12294 true Chr03: 33259899-33272192 Glycine max
Glyma.03G120900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 33259899-33269898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255382 5265 Fabidae View MSA
124073209 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.9039 0.0 171.159 High  
cufflinks 51.3295 0.0 158.563 High  
cufflinks 29.1613 0.0 92.5047 High Low
cufflinks 39.4596 0.0 118.544 High  
cufflinks 74.4099 0.0 246.235 High High
cufflinks 68.9903 0.0 224.14 High High
cufflinks 49.6843 0.0 160.367 High  
cufflinks 59.0097 0.0 200.883 High  
cufflinks 54.7251 0.0 170.481 High  
cufflinks 12.293     High  
cufflinks 2.854       Low
cufflinks 8.471     High  
cufflinks 24.156     High High
cufflinks 35.274     High High
cufflinks 3.503       Low
cufflinks 8.717     High  
cufflinks 9.146     High  
cufflinks 9.706     High  
cufflinks 12.282     High  
cufflinks 5.432        
cufflinks 5.457        
cufflinks 6.504        
cufflinks 11.182     High  
cufflinks 3.828       Low
cufflinks 7.224     High  
cufflinks 7.157     High  

0 Strain