Gene : Glyma.03G152000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10367:SF0 - MRNA-CAPPING ENZYME Genomic Order:  1520
Name:  ? Glyma.03G152000 Secondary Identifier:  ? PAC:30519065
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G152000 0.5kb upstream 0.5kb upstream 9519 true Chr03: 36702747-36712265 Glycine max
Glyma.03G152000 0.5kb upstream 0.5kb upstream 500 false Chr03: 36711766-36712265 Glycine max
Glyma.03G152000 0.5kb downstream 0.5kb downstream 9519 true Chr03: 36702247-36711765 Glycine max
Glyma.03G152000 0.5kb downstream 0.5kb downstream 500 false Chr03: 36702247-36702746 Glycine max
Glyma.03G152000 1.0kb upstream 1.0kb upstream 10019 true Chr03: 36702747-36712765 Glycine max
Glyma.03G152000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36711766-36712765 Glycine max
Glyma.03G152000 1.0kb downstream 1.0kb downstream 10019 true Chr03: 36701747-36711765 Glycine max
Glyma.03G152000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36701747-36702746 Glycine max
Glyma.03G152000 2.0kb upstream 2.0kb upstream 11019 true Chr03: 36702747-36713765 Glycine max
Glyma.03G152000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36711766-36713765 Glycine max
Glyma.03G152000 2.0kb downstream 2.0kb downstream 11019 true Chr03: 36700747-36711765 Glycine max
Glyma.03G152000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36700747-36702746 Glycine max
Glyma.03G152000 5.0kb upstream 5.0kb upstream 14019 true Chr03: 36702747-36716765 Glycine max
Glyma.03G152000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36711766-36716765 Glycine max
Glyma.03G152000 5.0kb downstream 5.0kb downstream 14019 true Chr03: 36697747-36711765 Glycine max
Glyma.03G152000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36697747-36702746 Glycine max
Glyma.03G152000 10.0kb upstream 10.0kb upstream 19019 true Chr03: 36702747-36721765 Glycine max
Glyma.03G152000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36711766-36721765 Glycine max
Glyma.03G152000 10.0kb downstream 10.0kb downstream 19019 true Chr03: 36692747-36711765 Glycine max
Glyma.03G152000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36692747-36702746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304249 5265 Fabidae View MSA
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.07967 0.0 16.7414   High
cufflinks 1.73546 0.0 9.23923    
cufflinks 4.33056 0.0 19.0471   High
cufflinks 2.27562 0.0 12.3465    
cufflinks 3.16669 0.0 15.7187    
cufflinks 3.2053 0.0 13.8845    
cufflinks 1.0793 0.0 6.65145   Low
cufflinks 2.46476 0.0 9.82101    
cufflinks 1.43823 0.0 8.36688   Low
cufflinks 0.15        
cufflinks 0.15        
cufflinks 0.193        
cufflinks 0.215        
cufflinks 0.176        
cufflinks 0.08       Low
cufflinks 0.25       High
cufflinks 0.155        
cufflinks 0.182        
cufflinks 0.148        
cufflinks 0.262       High
cufflinks 0.134        
cufflinks 0.277       High
cufflinks 0.209        
cufflinks 0.179        
cufflinks 0.218        
cufflinks 0.198        

0 Strain