Gene : Glyma.03G140900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31344:SF4 - NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN Genomic Order:  1409
Name:  ? Glyma.03G140900 Secondary Identifier:  ? PAC:30516440
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G140900 0.5kb upstream 0.5kb upstream 7337 true Chr03: 35700514-35707850 Glycine max
Glyma.03G140900 0.5kb upstream 0.5kb upstream 500 false Chr03: 35707351-35707850 Glycine max
Glyma.03G140900 0.5kb downstream 0.5kb downstream 7337 true Chr03: 35700014-35707350 Glycine max
Glyma.03G140900 0.5kb downstream 0.5kb downstream 500 false Chr03: 35700014-35700513 Glycine max
Glyma.03G140900 1.0kb upstream 1.0kb upstream 7837 true Chr03: 35700514-35708350 Glycine max
Glyma.03G140900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35707351-35708350 Glycine max
Glyma.03G140900 1.0kb downstream 1.0kb downstream 7837 true Chr03: 35699514-35707350 Glycine max
Glyma.03G140900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35699514-35700513 Glycine max
Glyma.03G140900 2.0kb upstream 2.0kb upstream 8837 true Chr03: 35700514-35709350 Glycine max
Glyma.03G140900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35707351-35709350 Glycine max
Glyma.03G140900 2.0kb downstream 2.0kb downstream 8837 true Chr03: 35698514-35707350 Glycine max
Glyma.03G140900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35698514-35700513 Glycine max
Glyma.03G140900 5.0kb upstream 5.0kb upstream 11837 true Chr03: 35700514-35712350 Glycine max
Glyma.03G140900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35707351-35712350 Glycine max
Glyma.03G140900 5.0kb downstream 5.0kb downstream 11837 true Chr03: 35695514-35707350 Glycine max
Glyma.03G140900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35695514-35700513 Glycine max
Glyma.03G140900 10.0kb upstream 10.0kb upstream 16837 true Chr03: 35700514-35717350 Glycine max
Glyma.03G140900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35707351-35717350 Glycine max
Glyma.03G140900 10.0kb downstream 10.0kb downstream 16837 true Chr03: 35690514-35707350 Glycine max
Glyma.03G140900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35690514-35700513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304118 5265 Fabidae View MSA
124068078 5270 Rosid View MSA
123737150 5271 Pentapetalae View MSA
122789303 5272 Eudicot View MSA
122047501 5273 Angiosperm View MSA
121349213 5274 Embryophyte View MSA
123425563 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52483 0.0 16.4835   Low
cufflinks 18.6379 0.0 72.527   High
cufflinks 6.70113 0.0 24.1258    
cufflinks 6.41109 0.0 23.4281    
cufflinks 20.7307 0.0 78.6331 High High
cufflinks 18.1237 0.0 64.4877    
cufflinks 9.36453 0.0 29.2183    
cufflinks 11.5611 0.0 40.2518    
cufflinks 14.0765 0.0 49.1914    
cufflinks 5.343       High
cufflinks 0.83       Low
cufflinks 2.613        
cufflinks 5.87       High
cufflinks 4.04        
cufflinks 4.978       High
cufflinks 2.679        
cufflinks 1.353        
cufflinks 2.645        
cufflinks 5.043       High
cufflinks 1.358        
cufflinks 1.404        
cufflinks 2.061        
cufflinks 1.742        
cufflinks 0.539       Low
cufflinks 1.914        
cufflinks 2.177        

0 Strain