Gene : Glyma.03G130800 G. max Wm82.a2.v1
Defline:  (1 of 8) PF13202//PF13499 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7) Genomic Order:  1308
Name:  ? Glyma.03G130800 Secondary Identifier:  ? PAC:30518651
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G130800 0.5kb upstream 0.5kb upstream 1792 true Chr03: 34589840-34591631 Glycine max
Glyma.03G130800 0.5kb upstream 0.5kb upstream 500 false Chr03: 34591132-34591631 Glycine max
Glyma.03G130800 0.5kb downstream 0.5kb downstream 1792 true Chr03: 34589340-34591131 Glycine max
Glyma.03G130800 0.5kb downstream 0.5kb downstream 500 false Chr03: 34589340-34589839 Glycine max
Glyma.03G130800 1.0kb upstream 1.0kb upstream 2292 true Chr03: 34589840-34592131 Glycine max
Glyma.03G130800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 34591132-34592131 Glycine max
Glyma.03G130800 1.0kb downstream 1.0kb downstream 2292 true Chr03: 34588840-34591131 Glycine max
Glyma.03G130800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 34588840-34589839 Glycine max
Glyma.03G130800 2.0kb upstream 2.0kb upstream 3292 true Chr03: 34589840-34593131 Glycine max
Glyma.03G130800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 34591132-34593131 Glycine max
Glyma.03G130800 2.0kb downstream 2.0kb downstream 3292 true Chr03: 34587840-34591131 Glycine max
Glyma.03G130800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 34587840-34589839 Glycine max
Glyma.03G130800 5.0kb upstream 5.0kb upstream 6292 true Chr03: 34589840-34596131 Glycine max
Glyma.03G130800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 34591132-34596131 Glycine max
Glyma.03G130800 5.0kb downstream 5.0kb downstream 6292 true Chr03: 34584840-34591131 Glycine max
Glyma.03G130800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 34584840-34589839 Glycine max
Glyma.03G130800 10.0kb upstream 10.0kb upstream 11292 true Chr03: 34589840-34601131 Glycine max
Glyma.03G130800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 34591132-34601131 Glycine max
Glyma.03G130800 10.0kb downstream 10.0kb downstream 11292 true Chr03: 34579840-34591131 Glycine max
Glyma.03G130800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 34579840-34589839 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302946 5265 Fabidae View MSA
124061078 5270 Rosid View MSA
123739522 5271 Pentapetalae View MSA
122793851 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.7857 0.0 152.978 High  
cufflinks 49.2011 0.0 133.377 High  
cufflinks 41.6466 0.0 111.722 High  
cufflinks 71.0908 0.0 198.514 High High
cufflinks 43.6748 0.0 118.187 High  
cufflinks 51.8758 0.0 141.501 High  
cufflinks 23.1123 0.0 61.7523 High Low
cufflinks 37.7728 0.0 101.188 High  
cufflinks 44.7756 0.0 120.979 High  
cufflinks 52.981     High High
cufflinks 35.71     High  
cufflinks 47.385     High  
cufflinks 21.328     High  
cufflinks 14.181     High Low
cufflinks 21.233     High  
cufflinks 23.121     High  
cufflinks 75.278     High High
cufflinks 51.598     High High
cufflinks 35.24     High  
cufflinks 20.135     High  
cufflinks 34.789     High  
cufflinks 20.084     High  
cufflinks 28.345     High  
cufflinks 33.076     High  
cufflinks 15.093     High Low
cufflinks 43.599     High  

0 Strain