Gene : Glyma.03G137700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  1377
Name:  ? Glyma.03G137700 Secondary Identifier:  ? PAC:30518565
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G137700 0.5kb upstream 0.5kb upstream 3621 true Chr03: 35379007-35382627 Glycine max
Glyma.03G137700 0.5kb upstream 0.5kb upstream 500 false Chr03: 35382128-35382627 Glycine max
Glyma.03G137700 0.5kb downstream 0.5kb downstream 3621 true Chr03: 35378507-35382127 Glycine max
Glyma.03G137700 0.5kb downstream 0.5kb downstream 500 false Chr03: 35378507-35379006 Glycine max
Glyma.03G137700 1.0kb upstream 1.0kb upstream 4121 true Chr03: 35379007-35383127 Glycine max
Glyma.03G137700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 35382128-35383127 Glycine max
Glyma.03G137700 1.0kb downstream 1.0kb downstream 4121 true Chr03: 35378007-35382127 Glycine max
Glyma.03G137700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 35378007-35379006 Glycine max
Glyma.03G137700 2.0kb upstream 2.0kb upstream 5121 true Chr03: 35379007-35384127 Glycine max
Glyma.03G137700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 35382128-35384127 Glycine max
Glyma.03G137700 2.0kb downstream 2.0kb downstream 5121 true Chr03: 35377007-35382127 Glycine max
Glyma.03G137700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 35377007-35379006 Glycine max
Glyma.03G137700 5.0kb upstream 5.0kb upstream 8121 true Chr03: 35379007-35387127 Glycine max
Glyma.03G137700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 35382128-35387127 Glycine max
Glyma.03G137700 5.0kb downstream 5.0kb downstream 8121 true Chr03: 35374007-35382127 Glycine max
Glyma.03G137700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 35374007-35379006 Glycine max
Glyma.03G137700 10.0kb upstream 10.0kb upstream 13121 true Chr03: 35379007-35392127 Glycine max
Glyma.03G137700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 35382128-35392127 Glycine max
Glyma.03G137700 10.0kb downstream 10.0kb downstream 13121 true Chr03: 35369007-35382127 Glycine max
Glyma.03G137700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 35369007-35379006 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314291 5265 Fabidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0080439 0.0 0.0380577 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0895712 0.0 0.356938 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.081182 0.0 0.324739 Low  
cufflinks 4.50332 0.0 13.3048   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.845       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain