Gene : Glyma.03G162100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  1621
Name:  ? Glyma.03G162100 Secondary Identifier:  ? PAC:30516224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G162100 0.5kb upstream 0.5kb upstream 8029 true Chr03: 37703129-37711157 Glycine max
Glyma.03G162100 0.5kb upstream 0.5kb upstream 500 false Chr03: 37703129-37703628 Glycine max
Glyma.03G162100 0.5kb downstream 0.5kb downstream 8029 true Chr03: 37703629-37711657 Glycine max
Glyma.03G162100 0.5kb downstream 0.5kb downstream 500 false Chr03: 37711158-37711657 Glycine max
Glyma.03G162100 1.0kb upstream 1.0kb upstream 8529 true Chr03: 37702629-37711157 Glycine max
Glyma.03G162100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37702629-37703628 Glycine max
Glyma.03G162100 1.0kb downstream 1.0kb downstream 8529 true Chr03: 37703629-37712157 Glycine max
Glyma.03G162100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37711158-37712157 Glycine max
Glyma.03G162100 2.0kb upstream 2.0kb upstream 9529 true Chr03: 37701629-37711157 Glycine max
Glyma.03G162100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37701629-37703628 Glycine max
Glyma.03G162100 2.0kb downstream 2.0kb downstream 9529 true Chr03: 37703629-37713157 Glycine max
Glyma.03G162100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37711158-37713157 Glycine max
Glyma.03G162100 5.0kb upstream 5.0kb upstream 12529 true Chr03: 37698629-37711157 Glycine max
Glyma.03G162100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37698629-37703628 Glycine max
Glyma.03G162100 5.0kb downstream 5.0kb downstream 12529 true Chr03: 37703629-37716157 Glycine max
Glyma.03G162100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37711158-37716157 Glycine max
Glyma.03G162100 10.0kb upstream 10.0kb upstream 17529 true Chr03: 37693629-37711157 Glycine max
Glyma.03G162100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37693629-37703628 Glycine max
Glyma.03G162100 10.0kb downstream 10.0kb downstream 17529 true Chr03: 37703629-37721157 Glycine max
Glyma.03G162100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37711158-37721157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.40406 0.0 28.9299    
cufflinks 4.18478 0.0 16.0881    
cufflinks 15.08 0.0 59.2349   High
cufflinks 4.6624 0.0 19.4641    
cufflinks 3.43103 0.0 14.3918   Low
cufflinks 8.05042 0.0 31.8764    
cufflinks 4.64156 0.0 19.3958    
cufflinks 5.52673 0.0 19.8253    
cufflinks 5.17588 0.0 19.7199    
cufflinks 0.607        
cufflinks 1.558       High
cufflinks 1.027        
cufflinks 0.547        
cufflinks 0.38       Low
cufflinks 1.062        
cufflinks 0.507        
cufflinks 0.873        
cufflinks 0.609        
cufflinks 0.59        
cufflinks 0.517        
cufflinks 0.913        
cufflinks 0.582        
cufflinks 0.514        
cufflinks 1.842       High
cufflinks 0.531        
cufflinks 0.966        

0 Strain