Gene : Glyma.03G163000 G. max Wm82.a2.v1
Defline:  (1 of 13) KOG4249 - Uncharacterized conserved protein Genomic Order:  1630
Name:  ? Glyma.03G163000 Secondary Identifier:  ? PAC:30515434
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G163000 0.5kb upstream 0.5kb upstream 4766 true Chr03: 37782788-37787553 Glycine max
Glyma.03G163000 0.5kb upstream 0.5kb upstream 500 false Chr03: 37782788-37783287 Glycine max
Glyma.03G163000 0.5kb downstream 0.5kb downstream 4766 true Chr03: 37783288-37788053 Glycine max
Glyma.03G163000 0.5kb downstream 0.5kb downstream 500 false Chr03: 37787554-37788053 Glycine max
Glyma.03G163000 1.0kb upstream 1.0kb upstream 5266 true Chr03: 37782288-37787553 Glycine max
Glyma.03G163000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37782288-37783287 Glycine max
Glyma.03G163000 1.0kb downstream 1.0kb downstream 5266 true Chr03: 37783288-37788553 Glycine max
Glyma.03G163000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37787554-37788553 Glycine max
Glyma.03G163000 2.0kb upstream 2.0kb upstream 6266 true Chr03: 37781288-37787553 Glycine max
Glyma.03G163000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37781288-37783287 Glycine max
Glyma.03G163000 2.0kb downstream 2.0kb downstream 6266 true Chr03: 37783288-37789553 Glycine max
Glyma.03G163000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37787554-37789553 Glycine max
Glyma.03G163000 5.0kb upstream 5.0kb upstream 9266 true Chr03: 37778288-37787553 Glycine max
Glyma.03G163000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37778288-37783287 Glycine max
Glyma.03G163000 5.0kb downstream 5.0kb downstream 9266 true Chr03: 37783288-37792553 Glycine max
Glyma.03G163000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37787554-37792553 Glycine max
Glyma.03G163000 10.0kb upstream 10.0kb upstream 14266 true Chr03: 37773288-37787553 Glycine max
Glyma.03G163000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37773288-37783287 Glycine max
Glyma.03G163000 10.0kb downstream 10.0kb downstream 14266 true Chr03: 37783288-37797553 Glycine max
Glyma.03G163000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37787554-37797553 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310912 5265 Fabidae View MSA
124063079 5270 Rosid View MSA
123739166 5271 Pentapetalae View MSA
122791185 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.88248 0.0 17.0077    
cufflinks 4.10239 0.0 14.9704    
cufflinks 2.64914 0.0 10.8694   Low
cufflinks 3.66883 0.0 13.7643    
cufflinks 5.89042 0.0 19.6098    
cufflinks 6.74499 0.0 22.9929   High
cufflinks 4.15058 0.0 15.1253    
cufflinks 3.96067 0.0 15.6692    
cufflinks 5.42555 0.0 18.3495    
cufflinks 1.059        
cufflinks 0.306       Low
cufflinks 1.075        
cufflinks 1.796       High
cufflinks 1.968       High
cufflinks 0.698        
cufflinks 1.387        
cufflinks 0.686        
cufflinks 1.419        
cufflinks 1.487        
cufflinks 1.156        
cufflinks 0.642        
cufflinks 1.192        
cufflinks 1.983       High
cufflinks 0.372       Low
cufflinks 1.271        
cufflinks 0.625        

0 Strain