Gene : Glyma.03G157000 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  1570
Name:  ? Glyma.03G157000 Secondary Identifier:  ? PAC:30515429
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G157000 0.5kb upstream 0.5kb upstream 4976 true Chr03: 37234261-37239236 Glycine max
Glyma.03G157000 0.5kb upstream 0.5kb upstream 500 false Chr03: 37234261-37234760 Glycine max
Glyma.03G157000 0.5kb downstream 0.5kb downstream 4976 true Chr03: 37234761-37239736 Glycine max
Glyma.03G157000 0.5kb downstream 0.5kb downstream 500 false Chr03: 37239237-37239736 Glycine max
Glyma.03G157000 1.0kb upstream 1.0kb upstream 5476 true Chr03: 37233761-37239236 Glycine max
Glyma.03G157000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37233761-37234760 Glycine max
Glyma.03G157000 1.0kb downstream 1.0kb downstream 5476 true Chr03: 37234761-37240236 Glycine max
Glyma.03G157000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37239237-37240236 Glycine max
Glyma.03G157000 2.0kb upstream 2.0kb upstream 6476 true Chr03: 37232761-37239236 Glycine max
Glyma.03G157000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37232761-37234760 Glycine max
Glyma.03G157000 2.0kb downstream 2.0kb downstream 6476 true Chr03: 37234761-37241236 Glycine max
Glyma.03G157000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37239237-37241236 Glycine max
Glyma.03G157000 5.0kb upstream 5.0kb upstream 9476 true Chr03: 37229761-37239236 Glycine max
Glyma.03G157000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37229761-37234760 Glycine max
Glyma.03G157000 5.0kb downstream 5.0kb downstream 9476 true Chr03: 37234761-37244236 Glycine max
Glyma.03G157000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37239237-37244236 Glycine max
Glyma.03G157000 10.0kb upstream 10.0kb upstream 14476 true Chr03: 37224761-37239236 Glycine max
Glyma.03G157000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37224761-37234760 Glycine max
Glyma.03G157000 10.0kb downstream 10.0kb downstream 14476 true Chr03: 37234761-37249236 Glycine max
Glyma.03G157000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37239237-37249236 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245678 5265 Fabidae Singleton cluster - no MSA
124060539 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.12413 0.0 23.155   High
cufflinks 1.45123 0.0 5.44061    
cufflinks 3.04362 0.0 14.8173    
cufflinks 1.78265 0.0 6.42941    
cufflinks 0.427071 0.0 2.02269   Low
cufflinks 1.13936 0.0 4.60406    
cufflinks 3.46566 0.0 17.2014    
cufflinks 3.79038 0.0 16.6322    
cufflinks 0.943       High
cufflinks 0.002     Low Low
cufflinks 0.398       High
cufflinks 0.049     Low  
cufflinks 0.017     Low  
cufflinks 0.021     Low  
cufflinks 0.075     Low  
cufflinks 0.05     Low  
cufflinks 0.267       High
cufflinks 0.597       High
cufflinks 0.018     Low  
cufflinks 0.008     Low Low
cufflinks 0.048     Low  
cufflinks 0.212        
cufflinks 0.015     Low  
cufflinks 0.037     Low  
cufflinks 0.012     Low  

0 Strain