Gene : Glyma.03G172900 G. max Wm82.a2.v1
Defline:  (1 of 135) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1729
Name:  ? Glyma.03G172900 Secondary Identifier:  ? PAC:30517828
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G172900 0.5kb upstream 0.5kb upstream 3434 true Chr03: 38701835-38705268 Glycine max
Glyma.03G172900 0.5kb upstream 0.5kb upstream 500 false Chr03: 38701835-38702334 Glycine max
Glyma.03G172900 0.5kb downstream 0.5kb downstream 3434 true Chr03: 38702335-38705768 Glycine max
Glyma.03G172900 0.5kb downstream 0.5kb downstream 500 false Chr03: 38705269-38705768 Glycine max
Glyma.03G172900 1.0kb upstream 1.0kb upstream 3934 true Chr03: 38701335-38705268 Glycine max
Glyma.03G172900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38701335-38702334 Glycine max
Glyma.03G172900 1.0kb downstream 1.0kb downstream 3934 true Chr03: 38702335-38706268 Glycine max
Glyma.03G172900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38705269-38706268 Glycine max
Glyma.03G172900 2.0kb upstream 2.0kb upstream 4934 true Chr03: 38700335-38705268 Glycine max
Glyma.03G172900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38700335-38702334 Glycine max
Glyma.03G172900 2.0kb downstream 2.0kb downstream 4934 true Chr03: 38702335-38707268 Glycine max
Glyma.03G172900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38705269-38707268 Glycine max
Glyma.03G172900 5.0kb upstream 5.0kb upstream 7934 true Chr03: 38697335-38705268 Glycine max
Glyma.03G172900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38697335-38702334 Glycine max
Glyma.03G172900 5.0kb downstream 5.0kb downstream 7934 true Chr03: 38702335-38710268 Glycine max
Glyma.03G172900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38705269-38710268 Glycine max
Glyma.03G172900 10.0kb upstream 10.0kb upstream 12934 true Chr03: 38692335-38705268 Glycine max
Glyma.03G172900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38692335-38702334 Glycine max
Glyma.03G172900 10.0kb downstream 10.0kb downstream 12934 true Chr03: 38702335-38715268 Glycine max
Glyma.03G172900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38705269-38715268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308286 5265 Fabidae View MSA
124069279 5270 Rosid View MSA
123751388 5271 Pentapetalae View MSA
122794828 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.23479 0.0 10.4368    
cufflinks 10.6965 0.0 29.5975    
cufflinks 3.23869 0.0 10.3639    
cufflinks 11.5476 0.0 31.7096    
cufflinks 2.62596 0.0 8.70928    
cufflinks 0.604337 0.0 2.24915   Low
cufflinks 88.5082 0.0 257.75 High High
cufflinks 12.3252 0.0 33.6976    
cufflinks 2.90447 0.0 9.48865    
cufflinks 24.334     High High
cufflinks 0.131       Low
cufflinks 2.03        
cufflinks 1.865        
cufflinks 0.072     Low Low
cufflinks 0.388        
cufflinks 6.092        
cufflinks 0.984        
cufflinks 1.692        
cufflinks 1.075        
cufflinks 5.793        
cufflinks 0.261        
cufflinks 5.617        
cufflinks 3.918        
cufflinks 0.13       Low
cufflinks 6.198        
cufflinks 0.537        

0 Strain