Gene : Glyma.03G169900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24106:SF146 - RNI-LIKE SUPERFAMILY PROTEIN Genomic Order:  1699
Name:  ? Glyma.03G169900 Secondary Identifier:  ? PAC:30516619
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G169900 0.5kb upstream 0.5kb upstream 7626 true Chr03: 38461402-38469027 Glycine max
Glyma.03G169900 0.5kb upstream 0.5kb upstream 500 false Chr03: 38461402-38461901 Glycine max
Glyma.03G169900 0.5kb downstream 0.5kb downstream 7626 true Chr03: 38461902-38469527 Glycine max
Glyma.03G169900 0.5kb downstream 0.5kb downstream 500 false Chr03: 38469028-38469527 Glycine max
Glyma.03G169900 1.0kb upstream 1.0kb upstream 8126 true Chr03: 38460902-38469027 Glycine max
Glyma.03G169900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38460902-38461901 Glycine max
Glyma.03G169900 1.0kb downstream 1.0kb downstream 8126 true Chr03: 38461902-38470027 Glycine max
Glyma.03G169900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38469028-38470027 Glycine max
Glyma.03G169900 2.0kb upstream 2.0kb upstream 9126 true Chr03: 38459902-38469027 Glycine max
Glyma.03G169900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38459902-38461901 Glycine max
Glyma.03G169900 2.0kb downstream 2.0kb downstream 9126 true Chr03: 38461902-38471027 Glycine max
Glyma.03G169900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38469028-38471027 Glycine max
Glyma.03G169900 5.0kb upstream 5.0kb upstream 12126 true Chr03: 38456902-38469027 Glycine max
Glyma.03G169900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38456902-38461901 Glycine max
Glyma.03G169900 5.0kb downstream 5.0kb downstream 12126 true Chr03: 38461902-38474027 Glycine max
Glyma.03G169900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38469028-38474027 Glycine max
Glyma.03G169900 10.0kb upstream 10.0kb upstream 17126 true Chr03: 38451902-38469027 Glycine max
Glyma.03G169900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38451902-38461901 Glycine max
Glyma.03G169900 10.0kb downstream 10.0kb downstream 17126 true Chr03: 38461902-38479027 Glycine max
Glyma.03G169900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38469028-38479027 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305677 5265 Fabidae View MSA
124050272 5270 Rosid View MSA
123739993 5271 Pentapetalae View MSA
122792810 5272 Eudicot View MSA
122043021 5273 Angiosperm View MSA
121348154 5274 Embryophyte View MSA
123380748 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2035 0.0 57.9965   High
cufflinks 7.51282 0.0 29.1603    
cufflinks 9.50341 0.0 39.7894    
cufflinks 6.52328 0.0 26.3443    
cufflinks 5.59307 0.0 23.6366    
cufflinks 4.9164 0.0 21.3769   Low
cufflinks 5.32102 0.0 22.5301    
cufflinks 8.41629 0.0 32.5947    
cufflinks 7.04205 0.0 28.2027    
cufflinks 0.721        
cufflinks 0.627        
cufflinks 0.782        
cufflinks 0.667        
cufflinks 0.565        
cufflinks 0.524       Low
cufflinks 1.262       High
cufflinks 0.485       Low
cufflinks 0.658        
cufflinks 0.929        
cufflinks 1.299       High
cufflinks 0.762        
cufflinks 1.497       High
cufflinks 0.761        
cufflinks 0.82        
cufflinks 1.091       High
cufflinks 0.607        

0 Strain