Gene : Glyma.03G184600 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1645 - RING-finger-containing E3 ubiquitin ligase Genomic Order:  1846
Name:  ? Glyma.03G184600 Secondary Identifier:  ? PAC:30518465
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G184600 0.5kb upstream 0.5kb upstream 7178 true Chr03: 39640612-39647789 Glycine max
Glyma.03G184600 0.5kb upstream 0.5kb upstream 500 false Chr03: 39647290-39647789 Glycine max
Glyma.03G184600 0.5kb downstream 0.5kb downstream 7178 true Chr03: 39640112-39647289 Glycine max
Glyma.03G184600 0.5kb downstream 0.5kb downstream 500 false Chr03: 39640112-39640611 Glycine max
Glyma.03G184600 1.0kb upstream 1.0kb upstream 7678 true Chr03: 39640612-39648289 Glycine max
Glyma.03G184600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39647290-39648289 Glycine max
Glyma.03G184600 1.0kb downstream 1.0kb downstream 7678 true Chr03: 39639612-39647289 Glycine max
Glyma.03G184600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39639612-39640611 Glycine max
Glyma.03G184600 2.0kb upstream 2.0kb upstream 8678 true Chr03: 39640612-39649289 Glycine max
Glyma.03G184600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39647290-39649289 Glycine max
Glyma.03G184600 2.0kb downstream 2.0kb downstream 8678 true Chr03: 39638612-39647289 Glycine max
Glyma.03G184600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39638612-39640611 Glycine max
Glyma.03G184600 5.0kb upstream 5.0kb upstream 11678 true Chr03: 39640612-39652289 Glycine max
Glyma.03G184600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39647290-39652289 Glycine max
Glyma.03G184600 5.0kb downstream 5.0kb downstream 11678 true Chr03: 39635612-39647289 Glycine max
Glyma.03G184600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39635612-39640611 Glycine max
Glyma.03G184600 10.0kb upstream 10.0kb upstream 16678 true Chr03: 39640612-39657289 Glycine max
Glyma.03G184600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39647290-39657289 Glycine max
Glyma.03G184600 10.0kb downstream 10.0kb downstream 16678 true Chr03: 39630612-39647289 Glycine max
Glyma.03G184600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39630612-39640611 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306086 5265 Fabidae View MSA
124062474 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.45946 0.0 38.5535   High
cufflinks 7.49828 0.0 32.3152    
cufflinks 8.6376 0.0 39.2737   High
cufflinks 5.67922 0.0 23.4064    
cufflinks 5.19022 0.0 23.4621   Low
cufflinks 5.09518 0.0 21.1045   Low
cufflinks 5.89734 0.0 24.1574    
cufflinks 5.5831 0.0 28.1022    
cufflinks 6.44236 0.0 28.4027    
cufflinks 0.286       Low
cufflinks 0.415        
cufflinks 0.566        
cufflinks 0.419        
cufflinks 0.381        
cufflinks 0.495        
cufflinks 0.695       High
cufflinks 0.336       Low
cufflinks 0.539        
cufflinks 0.673       High
cufflinks 0.684       High
cufflinks 0.385        
cufflinks 0.729       High
cufflinks 0.703       High
cufflinks 0.521        
cufflinks 0.628        
cufflinks 0.401        

0 Strain