Gene : Glyma.03G188500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24012:SF455 - POLYADENYLATE-BINDING PROTEIN 7 Genomic Order:  1885
Name:  ? Glyma.03G188500 Secondary Identifier:  ? PAC:30518559
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G188500 0.5kb upstream 0.5kb upstream 5230 true Chr03: 39956960-39962189 Glycine max
Glyma.03G188500 0.5kb upstream 0.5kb upstream 500 false Chr03: 39956960-39957459 Glycine max
Glyma.03G188500 0.5kb downstream 0.5kb downstream 5230 true Chr03: 39957460-39962689 Glycine max
Glyma.03G188500 0.5kb downstream 0.5kb downstream 500 false Chr03: 39962190-39962689 Glycine max
Glyma.03G188500 1.0kb upstream 1.0kb upstream 5730 true Chr03: 39956460-39962189 Glycine max
Glyma.03G188500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39956460-39957459 Glycine max
Glyma.03G188500 1.0kb downstream 1.0kb downstream 5730 true Chr03: 39957460-39963189 Glycine max
Glyma.03G188500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39962190-39963189 Glycine max
Glyma.03G188500 2.0kb upstream 2.0kb upstream 6730 true Chr03: 39955460-39962189 Glycine max
Glyma.03G188500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39955460-39957459 Glycine max
Glyma.03G188500 2.0kb downstream 2.0kb downstream 6730 true Chr03: 39957460-39964189 Glycine max
Glyma.03G188500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39962190-39964189 Glycine max
Glyma.03G188500 5.0kb upstream 5.0kb upstream 9730 true Chr03: 39952460-39962189 Glycine max
Glyma.03G188500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39952460-39957459 Glycine max
Glyma.03G188500 5.0kb downstream 5.0kb downstream 9730 true Chr03: 39957460-39967189 Glycine max
Glyma.03G188500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39962190-39967189 Glycine max
Glyma.03G188500 10.0kb upstream 10.0kb upstream 14730 true Chr03: 39947460-39962189 Glycine max
Glyma.03G188500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39947460-39957459 Glycine max
Glyma.03G188500 10.0kb downstream 10.0kb downstream 14730 true Chr03: 39957460-39972189 Glycine max
Glyma.03G188500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39962190-39972189 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304060 5265 Fabidae View MSA
124062238 5270 Rosid View MSA
123739228 5271 Pentapetalae View MSA
122792204 5272 Eudicot View MSA
122046511 5273 Angiosperm View MSA
121310616 5274 Embryophyte View MSA
123348055 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.540846 0.0 3.36376   Low
cufflinks 2.24022 0.0 9.33143    
cufflinks 2.07022 0.0 8.99469    
cufflinks 5.7734 0.0 21.4767   High
cufflinks 1.99155 0.0 8.57135    
cufflinks 1.29023 0.0 6.48219    
cufflinks 9.01931 0.0 31.6539   High
cufflinks 0.875729 0.0 4.71937   Low
cufflinks 4.02785 0.0 14.1366    
cufflinks 0.407        
cufflinks 0.017     Low Low
cufflinks 0.854       High
cufflinks 0.13        
cufflinks 0.221        
cufflinks 1.409       High
cufflinks 0.211        
cufflinks 0.114        
cufflinks 1.497       High
cufflinks 1.108       High
cufflinks 0.148        
cufflinks 0.065        
cufflinks 0.166        
cufflinks 0.278        
cufflinks 0.033     Low Low
cufflinks 0.164        
cufflinks 0.107        

0 Strain