Gene : Glyma.03G179900 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1799
Name:  ? Glyma.03G179900 Secondary Identifier:  ? PAC:30516200
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G179900 0.5kb upstream 0.5kb upstream 1620 true Chr03: 39210354-39211973 Glycine max
Glyma.03G179900 0.5kb upstream 0.5kb upstream 500 false Chr03: 39211474-39211973 Glycine max
Glyma.03G179900 0.5kb downstream 0.5kb downstream 1620 true Chr03: 39209854-39211473 Glycine max
Glyma.03G179900 0.5kb downstream 0.5kb downstream 500 false Chr03: 39209854-39210353 Glycine max
Glyma.03G179900 1.0kb upstream 1.0kb upstream 2120 true Chr03: 39210354-39212473 Glycine max
Glyma.03G179900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39211474-39212473 Glycine max
Glyma.03G179900 1.0kb downstream 1.0kb downstream 2120 true Chr03: 39209354-39211473 Glycine max
Glyma.03G179900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39209354-39210353 Glycine max
Glyma.03G179900 2.0kb upstream 2.0kb upstream 3120 true Chr03: 39210354-39213473 Glycine max
Glyma.03G179900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39211474-39213473 Glycine max
Glyma.03G179900 2.0kb downstream 2.0kb downstream 3120 true Chr03: 39208354-39211473 Glycine max
Glyma.03G179900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39208354-39210353 Glycine max
Glyma.03G179900 5.0kb upstream 5.0kb upstream 6120 true Chr03: 39210354-39216473 Glycine max
Glyma.03G179900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39211474-39216473 Glycine max
Glyma.03G179900 5.0kb downstream 5.0kb downstream 6120 true Chr03: 39205354-39211473 Glycine max
Glyma.03G179900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39205354-39210353 Glycine max
Glyma.03G179900 10.0kb upstream 10.0kb upstream 11120 true Chr03: 39210354-39221473 Glycine max
Glyma.03G179900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39211474-39221473 Glycine max
Glyma.03G179900 10.0kb downstream 10.0kb downstream 11120 true Chr03: 39200354-39211473 Glycine max
Glyma.03G179900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39200354-39210353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309641 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7634 0.0 30.5036    
cufflinks 56.845 0.0 154.296 High  
cufflinks 2.66917 0.0 9.10632   Low
cufflinks 147.568 0.0 447.209 High High
cufflinks 20.1286 0.0 54.2733 High  
cufflinks 8.50221 0.0 24.7594    
cufflinks 43.267 0.0 116.001 High  
cufflinks 188.761 0.0 599.04 High High
cufflinks 29.0554 0.0 77.5457 High  
cufflinks 91.615     High High
cufflinks 0.57       Low
cufflinks 3.024        
cufflinks 13.701     High  
cufflinks 1.555        
cufflinks 0.15       Low
cufflinks 10.213     High  
cufflinks 16.276     High  
cufflinks 5.352        
cufflinks 47.256     High High
cufflinks 2.601        
cufflinks 1.914        
cufflinks 4.455        
cufflinks 5.623        
cufflinks 0.859       Low
cufflinks 6.087        
cufflinks 2.864        

0 Strain