Gene : Glyma.03G180000 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  1800
Name:  ? Glyma.03G180000 Secondary Identifier:  ? PAC:30516154
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G180000 0.5kb upstream 0.5kb upstream 1467 true Chr03: 39215124-39216590 Glycine max
Glyma.03G180000 0.5kb upstream 0.5kb upstream 500 false Chr03: 39216091-39216590 Glycine max
Glyma.03G180000 0.5kb downstream 0.5kb downstream 1467 true Chr03: 39214624-39216090 Glycine max
Glyma.03G180000 0.5kb downstream 0.5kb downstream 500 false Chr03: 39214624-39215123 Glycine max
Glyma.03G180000 1.0kb upstream 1.0kb upstream 1967 true Chr03: 39215124-39217090 Glycine max
Glyma.03G180000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39216091-39217090 Glycine max
Glyma.03G180000 1.0kb downstream 1.0kb downstream 1967 true Chr03: 39214124-39216090 Glycine max
Glyma.03G180000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39214124-39215123 Glycine max
Glyma.03G180000 2.0kb upstream 2.0kb upstream 2967 true Chr03: 39215124-39218090 Glycine max
Glyma.03G180000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39216091-39218090 Glycine max
Glyma.03G180000 2.0kb downstream 2.0kb downstream 2967 true Chr03: 39213124-39216090 Glycine max
Glyma.03G180000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39213124-39215123 Glycine max
Glyma.03G180000 5.0kb upstream 5.0kb upstream 5967 true Chr03: 39215124-39221090 Glycine max
Glyma.03G180000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39216091-39221090 Glycine max
Glyma.03G180000 5.0kb downstream 5.0kb downstream 5967 true Chr03: 39210124-39216090 Glycine max
Glyma.03G180000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39210124-39215123 Glycine max
Glyma.03G180000 10.0kb upstream 10.0kb upstream 10967 true Chr03: 39215124-39226090 Glycine max
Glyma.03G180000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39216091-39226090 Glycine max
Glyma.03G180000 10.0kb downstream 10.0kb downstream 10967 true Chr03: 39205124-39216090 Glycine max
Glyma.03G180000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39205124-39215123 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309641 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.42607 0.0 17.1587    
cufflinks 29.0512 0.0 77.693 High  
cufflinks 1.42836 0.0 5.17592   Low
cufflinks 33.4431 0.0 89.2452 High  
cufflinks 9.99584 0.0 28.914    
cufflinks 4.60237 0.0 14.8439    
cufflinks 18.2059 0.0 49.7126    
cufflinks 57.8147 0.0 156.224 High High
cufflinks 14.2047 0.0 39.5503    
cufflinks 21.566     High High
cufflinks 0.223       Low
cufflinks 1.113        
cufflinks 5.538        
cufflinks 0.307       Low
cufflinks 0.214       Low
cufflinks 5.708        
cufflinks 4.748        
cufflinks 0.94        
cufflinks 24.527     High High
cufflinks 1.534        
cufflinks 0.598        
cufflinks 2.503        
cufflinks 1.971        
cufflinks 0.374       Low
cufflinks 3.364        
cufflinks 1.204        

0 Strain