Gene : Glyma.03G179000 G. max Wm82.a2.v1
Defline:  (1 of 4) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  1790
Name:  ? Glyma.03G179000 Secondary Identifier:  ? PAC:30517062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G179000 0.5kb upstream 0.5kb upstream 2183 true Chr03: 39133584-39135766 Glycine max
Glyma.03G179000 0.5kb upstream 0.5kb upstream 500 false Chr03: 39135267-39135766 Glycine max
Glyma.03G179000 0.5kb downstream 0.5kb downstream 2183 true Chr03: 39133084-39135266 Glycine max
Glyma.03G179000 0.5kb downstream 0.5kb downstream 500 false Chr03: 39133084-39133583 Glycine max
Glyma.03G179000 1.0kb upstream 1.0kb upstream 2683 true Chr03: 39133584-39136266 Glycine max
Glyma.03G179000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39135267-39136266 Glycine max
Glyma.03G179000 1.0kb downstream 1.0kb downstream 2683 true Chr03: 39132584-39135266 Glycine max
Glyma.03G179000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39132584-39133583 Glycine max
Glyma.03G179000 2.0kb upstream 2.0kb upstream 3683 true Chr03: 39133584-39137266 Glycine max
Glyma.03G179000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39135267-39137266 Glycine max
Glyma.03G179000 2.0kb downstream 2.0kb downstream 3683 true Chr03: 39131584-39135266 Glycine max
Glyma.03G179000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39131584-39133583 Glycine max
Glyma.03G179000 5.0kb upstream 5.0kb upstream 6683 true Chr03: 39133584-39140266 Glycine max
Glyma.03G179000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39135267-39140266 Glycine max
Glyma.03G179000 5.0kb downstream 5.0kb downstream 6683 true Chr03: 39128584-39135266 Glycine max
Glyma.03G179000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39128584-39133583 Glycine max
Glyma.03G179000 10.0kb upstream 10.0kb upstream 11683 true Chr03: 39133584-39145266 Glycine max
Glyma.03G179000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39135267-39145266 Glycine max
Glyma.03G179000 10.0kb downstream 10.0kb downstream 11683 true Chr03: 39123584-39135266 Glycine max
Glyma.03G179000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39123584-39133583 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250046 5265 Fabidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.441 0.0 57.7211   Low
cufflinks 38.0021 0.0 102.37 High  
cufflinks 15.7576 0.0 45.7336   Low
cufflinks 26.8967 0.0 73.8977 High  
cufflinks 46.659 0.0 124.797 High  
cufflinks 41.0985 0.0 110.341 High  
cufflinks 71.6808 0.0 191.606 High High
cufflinks 35.9204 0.0 96.8857 High  
cufflinks 55.4217 0.0 147.87 High  
cufflinks 8.737     High  
cufflinks 10.722     High  
cufflinks 7.199       Low
cufflinks 17.299     High High
cufflinks 19.774     High High
cufflinks 16.82     High High
cufflinks 8.935     High  
cufflinks 10.787     High  
cufflinks 8.444     High  
cufflinks 10.904     High  
cufflinks 8.955     High  
cufflinks 11.695     High  
cufflinks 9.281     High  
cufflinks 8.329     High  
cufflinks 11.783     High  
cufflinks 9.118     High  
cufflinks 11.158     High  

0 Strain