Gene : Glyma.03G179100 G. max Wm82.a2.v1
Defline:  (1 of 16) PF07939 - Protein of unknown function (DUF1685) Genomic Order:  1791
Name:  ? Glyma.03G179100 Secondary Identifier:  ? PAC:30517145
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G179100 0.5kb upstream 0.5kb upstream 2431 true Chr03: 39138161-39140591 Glycine max
Glyma.03G179100 0.5kb upstream 0.5kb upstream 500 false Chr03: 39140092-39140591 Glycine max
Glyma.03G179100 0.5kb downstream 0.5kb downstream 2431 true Chr03: 39137661-39140091 Glycine max
Glyma.03G179100 0.5kb downstream 0.5kb downstream 500 false Chr03: 39137661-39138160 Glycine max
Glyma.03G179100 1.0kb upstream 1.0kb upstream 2931 true Chr03: 39138161-39141091 Glycine max
Glyma.03G179100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39140092-39141091 Glycine max
Glyma.03G179100 1.0kb downstream 1.0kb downstream 2931 true Chr03: 39137161-39140091 Glycine max
Glyma.03G179100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39137161-39138160 Glycine max
Glyma.03G179100 2.0kb upstream 2.0kb upstream 3931 true Chr03: 39138161-39142091 Glycine max
Glyma.03G179100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39140092-39142091 Glycine max
Glyma.03G179100 2.0kb downstream 2.0kb downstream 3931 true Chr03: 39136161-39140091 Glycine max
Glyma.03G179100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39136161-39138160 Glycine max
Glyma.03G179100 5.0kb upstream 5.0kb upstream 6931 true Chr03: 39138161-39145091 Glycine max
Glyma.03G179100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39140092-39145091 Glycine max
Glyma.03G179100 5.0kb downstream 5.0kb downstream 6931 true Chr03: 39133161-39140091 Glycine max
Glyma.03G179100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39133161-39138160 Glycine max
Glyma.03G179100 10.0kb upstream 10.0kb upstream 11931 true Chr03: 39138161-39150091 Glycine max
Glyma.03G179100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39140092-39150091 Glycine max
Glyma.03G179100 10.0kb downstream 10.0kb downstream 11931 true Chr03: 39128161-39140091 Glycine max
Glyma.03G179100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39128161-39138160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307298 5265 Fabidae View MSA
124070867 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.86064 0.0 19.4149   High
cufflinks 1.32727 0.0 4.62163    
cufflinks 1.73452 0.0 5.8579    
cufflinks 3.0782 0.0 9.64626   High
cufflinks 0.319764 0.0 1.21395    
cufflinks 0.333123 0.0 1.26158    
cufflinks 1.37897 0.0 4.79811    
cufflinks 0.354661 0.0 1.33716    
cufflinks 0.269234 0.0 1.02822   Low
cufflinks 0.343        
cufflinks 0.037     Low Low
cufflinks 1.607        
cufflinks 1.164        
cufflinks 0.252        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.812        
cufflinks 0.085        
cufflinks 1.475        
cufflinks 1.194        
cufflinks 2.276        
cufflinks 0.042     Low Low
cufflinks 3.69       High
cufflinks 2.696        
cufflinks 0.019     Low Low
cufflinks 2.574        
cufflinks 0.119        

0 Strain