Gene : Glyma.03G176400 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  1764
Name:  ? Glyma.03G176400 Secondary Identifier:  ? PAC:30519149
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HISTSYN-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G176400 0.5kb upstream 0.5kb upstream 5098 true Chr03: 38938556-38943653 Glycine max
Glyma.03G176400 0.5kb upstream 0.5kb upstream 500 false Chr03: 38938556-38939055 Glycine max
Glyma.03G176400 0.5kb downstream 0.5kb downstream 5098 true Chr03: 38939056-38944153 Glycine max
Glyma.03G176400 0.5kb downstream 0.5kb downstream 500 false Chr03: 38943654-38944153 Glycine max
Glyma.03G176400 1.0kb upstream 1.0kb upstream 5598 true Chr03: 38938056-38943653 Glycine max
Glyma.03G176400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38938056-38939055 Glycine max
Glyma.03G176400 1.0kb downstream 1.0kb downstream 5598 true Chr03: 38939056-38944653 Glycine max
Glyma.03G176400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38943654-38944653 Glycine max
Glyma.03G176400 2.0kb upstream 2.0kb upstream 6598 true Chr03: 38937056-38943653 Glycine max
Glyma.03G176400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38937056-38939055 Glycine max
Glyma.03G176400 2.0kb downstream 2.0kb downstream 6598 true Chr03: 38939056-38945653 Glycine max
Glyma.03G176400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38943654-38945653 Glycine max
Glyma.03G176400 5.0kb upstream 5.0kb upstream 9598 true Chr03: 38934056-38943653 Glycine max
Glyma.03G176400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38934056-38939055 Glycine max
Glyma.03G176400 5.0kb downstream 5.0kb downstream 9598 true Chr03: 38939056-38948653 Glycine max
Glyma.03G176400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38943654-38948653 Glycine max
Glyma.03G176400 10.0kb upstream 10.0kb upstream 14598 true Chr03: 38929056-38943653 Glycine max
Glyma.03G176400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38929056-38939055 Glycine max
Glyma.03G176400 10.0kb downstream 10.0kb downstream 14598 true Chr03: 38939056-38953653 Glycine max
Glyma.03G176400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38943654-38953653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304289 5265 Fabidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3003 0.0 48.8887    
cufflinks 17.9021 0.0 47.8015    
cufflinks 9.69073 0.0 26.1333   Low
cufflinks 16.0979 0.0 42.9503    
cufflinks 21.7181 0.0 58.2897 High  
cufflinks 14.9104 0.0 39.7816    
cufflinks 26.6199 0.0 72.0604 High High
cufflinks 13.7055 0.0 36.5955    
cufflinks 18.2186 0.0 48.6691    
cufflinks 8.454     High  
cufflinks 2.083       Low
cufflinks 8.628     High  
cufflinks 12.766     High  
cufflinks 17.037     High High
cufflinks 2.675       Low
cufflinks 11.645     High  
cufflinks 4.531        
cufflinks 9.125     High  
cufflinks 9.429     High  
cufflinks 8.844     High  
cufflinks 2.994       Low
cufflinks 9.408     High  
cufflinks 14.997     High High
cufflinks 2.01       Low
cufflinks 10.396     High  
cufflinks 3.896        

0 Strain