Gene : Glyma.03G176200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  1762
Name:  ? Glyma.03G176200 Secondary Identifier:  ? PAC:30518304
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G176200 0.5kb upstream 0.5kb upstream 1759 true Chr03: 38929533-38931291 Glycine max
Glyma.03G176200 0.5kb upstream 0.5kb upstream 500 false Chr03: 38930792-38931291 Glycine max
Glyma.03G176200 0.5kb downstream 0.5kb downstream 1759 true Chr03: 38929033-38930791 Glycine max
Glyma.03G176200 0.5kb downstream 0.5kb downstream 500 false Chr03: 38929033-38929532 Glycine max
Glyma.03G176200 1.0kb upstream 1.0kb upstream 2259 true Chr03: 38929533-38931791 Glycine max
Glyma.03G176200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38930792-38931791 Glycine max
Glyma.03G176200 1.0kb downstream 1.0kb downstream 2259 true Chr03: 38928533-38930791 Glycine max
Glyma.03G176200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38928533-38929532 Glycine max
Glyma.03G176200 2.0kb upstream 2.0kb upstream 3259 true Chr03: 38929533-38932791 Glycine max
Glyma.03G176200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38930792-38932791 Glycine max
Glyma.03G176200 2.0kb downstream 2.0kb downstream 3259 true Chr03: 38927533-38930791 Glycine max
Glyma.03G176200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38927533-38929532 Glycine max
Glyma.03G176200 5.0kb upstream 5.0kb upstream 6259 true Chr03: 38929533-38935791 Glycine max
Glyma.03G176200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38930792-38935791 Glycine max
Glyma.03G176200 5.0kb downstream 5.0kb downstream 6259 true Chr03: 38924533-38930791 Glycine max
Glyma.03G176200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38924533-38929532 Glycine max
Glyma.03G176200 10.0kb upstream 10.0kb upstream 11259 true Chr03: 38929533-38940791 Glycine max
Glyma.03G176200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38930792-38940791 Glycine max
Glyma.03G176200 10.0kb downstream 10.0kb downstream 11259 true Chr03: 38919533-38930791 Glycine max
Glyma.03G176200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38919533-38929532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308646 5265 Fabidae View MSA
124060926 5270 Rosid View MSA
123742153 5271 Pentapetalae View MSA
122787533 5272 Eudicot View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3144 0.0 49.9808    
cufflinks 18.876 0.0 51.4973    
cufflinks 19.8542 0.0 54.192    
cufflinks 22.0395 0.0 59.5311 High  
cufflinks 22.7224 0.0 61.117 High  
cufflinks 11.0215 0.0 31.5608   Low
cufflinks 30.1805 0.0 80.6167 High High
cufflinks 18.9461 0.0 51.5767    
cufflinks 21.9173 0.0 59.1751 High  
cufflinks 14.153     High Low
cufflinks 22.11     High  
cufflinks 18.353     High  
cufflinks 16.03     High Low
cufflinks 19.229     High  
cufflinks 26.784     High High
cufflinks 21.18     High  
cufflinks 20.154     High  
cufflinks 19.094     High  
cufflinks 23.377     High  
cufflinks 18.718     High  
cufflinks 27.037     High High
cufflinks 20.352     High  
cufflinks 21.239     High  
cufflinks 21.206     High  
cufflinks 18.525     High  
cufflinks 22.749     High  

0 Strain