Gene : Glyma.03G180700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12713 - VACUOLAR ATP SYNTHASE SUBUNIT G Genomic Order:  1807
Name:  ? Glyma.03G180700 Secondary Identifier:  ? PAC:30516231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G180700 0.5kb upstream 0.5kb upstream 2815 true Chr03: 39261462-39264276 Glycine max
Glyma.03G180700 0.5kb upstream 0.5kb upstream 500 false Chr03: 39263777-39264276 Glycine max
Glyma.03G180700 0.5kb downstream 0.5kb downstream 2815 true Chr03: 39260962-39263776 Glycine max
Glyma.03G180700 0.5kb downstream 0.5kb downstream 500 false Chr03: 39260962-39261461 Glycine max
Glyma.03G180700 1.0kb upstream 1.0kb upstream 3315 true Chr03: 39261462-39264776 Glycine max
Glyma.03G180700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39263777-39264776 Glycine max
Glyma.03G180700 1.0kb downstream 1.0kb downstream 3315 true Chr03: 39260462-39263776 Glycine max
Glyma.03G180700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39260462-39261461 Glycine max
Glyma.03G180700 2.0kb upstream 2.0kb upstream 4315 true Chr03: 39261462-39265776 Glycine max
Glyma.03G180700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39263777-39265776 Glycine max
Glyma.03G180700 2.0kb downstream 2.0kb downstream 4315 true Chr03: 39259462-39263776 Glycine max
Glyma.03G180700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39259462-39261461 Glycine max
Glyma.03G180700 5.0kb upstream 5.0kb upstream 7315 true Chr03: 39261462-39268776 Glycine max
Glyma.03G180700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39263777-39268776 Glycine max
Glyma.03G180700 5.0kb downstream 5.0kb downstream 7315 true Chr03: 39256462-39263776 Glycine max
Glyma.03G180700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39256462-39261461 Glycine max
Glyma.03G180700 10.0kb upstream 10.0kb upstream 12315 true Chr03: 39261462-39273776 Glycine max
Glyma.03G180700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39263777-39273776 Glycine max
Glyma.03G180700 10.0kb downstream 10.0kb downstream 12315 true Chr03: 39251462-39263776 Glycine max
Glyma.03G180700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39251462-39261461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122310150 5265 Fabidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4312 0.0 36.1959    
cufflinks 16.1017 0.0 50.7165    
cufflinks 5.65452 0.0 17.7563   Low
cufflinks 22.7671 0.0 68.8138 High  
cufflinks 27.9317 0.0 83.3358 High  
cufflinks 43.9528 0.0 132.137 High High
cufflinks 14.5438 0.0 46.1654    
cufflinks 32.5509 0.0 97.2265 High  
cufflinks 19.6945 0.0 60.4268 High  
cufflinks 28.964     High High
cufflinks 5.436       Low
cufflinks 6.375        
cufflinks 24.008     High High
cufflinks 26.285     High High
cufflinks 3.811       Low
cufflinks 10.782     High  
cufflinks 7.659     High  
cufflinks 12.547     High  
cufflinks 10.023     High  
cufflinks 9.9     High  
cufflinks 7.774     High  
cufflinks 10.501     High  
cufflinks 14.476     High  
cufflinks 5.676       Low
cufflinks 11.243     High  
cufflinks 9.207     High  

0 Strain