Gene : Glyma.03G181200 G. max Wm82.a2.v1
Defline:  (1 of 4) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  1812
Name:  ? Glyma.03G181200 Secondary Identifier:  ? PAC:30518208
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G181200 0.5kb upstream 0.5kb upstream 6259 true Chr03: 39296126-39302384 Glycine max
Glyma.03G181200 0.5kb upstream 0.5kb upstream 500 false Chr03: 39301885-39302384 Glycine max
Glyma.03G181200 0.5kb downstream 0.5kb downstream 6259 true Chr03: 39295626-39301884 Glycine max
Glyma.03G181200 0.5kb downstream 0.5kb downstream 500 false Chr03: 39295626-39296125 Glycine max
Glyma.03G181200 1.0kb upstream 1.0kb upstream 6759 true Chr03: 39296126-39302884 Glycine max
Glyma.03G181200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 39301885-39302884 Glycine max
Glyma.03G181200 1.0kb downstream 1.0kb downstream 6759 true Chr03: 39295126-39301884 Glycine max
Glyma.03G181200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 39295126-39296125 Glycine max
Glyma.03G181200 2.0kb upstream 2.0kb upstream 7759 true Chr03: 39296126-39303884 Glycine max
Glyma.03G181200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 39301885-39303884 Glycine max
Glyma.03G181200 2.0kb downstream 2.0kb downstream 7759 true Chr03: 39294126-39301884 Glycine max
Glyma.03G181200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 39294126-39296125 Glycine max
Glyma.03G181200 5.0kb upstream 5.0kb upstream 10759 true Chr03: 39296126-39306884 Glycine max
Glyma.03G181200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 39301885-39306884 Glycine max
Glyma.03G181200 5.0kb downstream 5.0kb downstream 10759 true Chr03: 39291126-39301884 Glycine max
Glyma.03G181200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 39291126-39296125 Glycine max
Glyma.03G181200 10.0kb upstream 10.0kb upstream 15759 true Chr03: 39296126-39311884 Glycine max
Glyma.03G181200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 39301885-39311884 Glycine max
Glyma.03G181200 10.0kb downstream 10.0kb downstream 15759 true Chr03: 39286126-39301884 Glycine max
Glyma.03G181200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 39286126-39296125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309738 5265 Fabidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.5766 0.0 232.493 High  
cufflinks 59.2436 0.0 231.467 High  
cufflinks 21.0469 0.0 69.5663 High Low
cufflinks 45.4322 0.0 166.442 High  
cufflinks 67.2692 0.0 272.599 High  
cufflinks 39.1556 0.0 138.557 High  
cufflinks 80.027 0.0 290.604 High High
cufflinks 46.5075 0.0 173.737 High  
cufflinks 54.1174 0.0 207.969 High  
cufflinks 7.211        
cufflinks 1.272       Low
cufflinks 6.046        
cufflinks 11.882     High High
cufflinks 14.053     High High
cufflinks 1.994       Low
cufflinks 8.985     High  
cufflinks 4.489        
cufflinks 7.309     High  
cufflinks 9.183     High  
cufflinks 7.252     High  
cufflinks 2.353       Low
cufflinks 8.309     High  
cufflinks 9.573     High  
cufflinks 2.116       Low
cufflinks 7.87     High  
cufflinks 3.775        

0 Strain