Gene : Glyma.19G109400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10438:SF245 - THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED Genomic Order:  1094
Name:  ? Glyma.19G109400 Secondary Identifier:  ? PAC:30513779
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G109400 0.5kb upstream 0.5kb upstream 3044 true Chr19: 36265402-36268445 Glycine max
Glyma.19G109400 0.5kb upstream 0.5kb upstream 500 false Chr19: 36265402-36265901 Glycine max
Glyma.19G109400 0.5kb downstream 0.5kb downstream 3044 true Chr19: 36265902-36268945 Glycine max
Glyma.19G109400 0.5kb downstream 0.5kb downstream 500 false Chr19: 36268446-36268945 Glycine max
Glyma.19G109400 1.0kb upstream 1.0kb upstream 3544 true Chr19: 36264902-36268445 Glycine max
Glyma.19G109400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 36264902-36265901 Glycine max
Glyma.19G109400 1.0kb downstream 1.0kb downstream 3544 true Chr19: 36265902-36269445 Glycine max
Glyma.19G109400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 36268446-36269445 Glycine max
Glyma.19G109400 2.0kb upstream 2.0kb upstream 4544 true Chr19: 36263902-36268445 Glycine max
Glyma.19G109400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 36263902-36265901 Glycine max
Glyma.19G109400 2.0kb downstream 2.0kb downstream 4544 true Chr19: 36265902-36270445 Glycine max
Glyma.19G109400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 36268446-36270445 Glycine max
Glyma.19G109400 5.0kb upstream 5.0kb upstream 7544 true Chr19: 36260902-36268445 Glycine max
Glyma.19G109400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 36260902-36265901 Glycine max
Glyma.19G109400 5.0kb downstream 5.0kb downstream 7544 true Chr19: 36265902-36273445 Glycine max
Glyma.19G109400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 36268446-36273445 Glycine max
Glyma.19G109400 10.0kb upstream 10.0kb upstream 12544 true Chr19: 36255902-36268445 Glycine max
Glyma.19G109400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 36255902-36265901 Glycine max
Glyma.19G109400 10.0kb downstream 10.0kb downstream 12544 true Chr19: 36265902-36278445 Glycine max
Glyma.19G109400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 36268446-36278445 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303235 5265 Fabidae View MSA
124067086 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.2221 0.0 97.5791 High High
cufflinks 22.8173 0.0 60.874 High  
cufflinks 38.2487 0.0 103.579 High High
cufflinks 21.3014 0.0 56.8436 High  
cufflinks 17.9715 0.0 48.1187    
cufflinks 20.8944 0.0 55.7744    
cufflinks 12.0784 0.0 32.9338   Low
cufflinks 15.3109 0.0 41.1521    
cufflinks 19.1949 0.0 51.2865    
cufflinks 5.768       Low
cufflinks 87.38     High High
cufflinks 20.369     High  
cufflinks 8.652     High Low
cufflinks 7.26     High Low
cufflinks 68.7     High High
cufflinks 36.418     High  
cufflinks 12.344     High  
cufflinks 26.176     High  
cufflinks 17.298     High  
cufflinks 33.594     High  
cufflinks 74.06     High High
cufflinks 23.729     High  
cufflinks 19.513     High  
cufflinks 61.998     High High
cufflinks 39.899     High  
cufflinks 49.1     High  

0 Strain