Gene : Glyma.03G189200 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02987 - Late embryogenesis abundant protein (LEA_4) Genomic Order:  1892
Name:  ? Glyma.03G189200 Secondary Identifier:  ? PAC:30516727
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G189200 0.5kb upstream 0.5kb upstream 1930 true Chr03: 40015674-40017603 Glycine max
Glyma.03G189200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40015674-40016173 Glycine max
Glyma.03G189200 0.5kb downstream 0.5kb downstream 1930 true Chr03: 40016174-40018103 Glycine max
Glyma.03G189200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40017604-40018103 Glycine max
Glyma.03G189200 1.0kb upstream 1.0kb upstream 2430 true Chr03: 40015174-40017603 Glycine max
Glyma.03G189200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40015174-40016173 Glycine max
Glyma.03G189200 1.0kb downstream 1.0kb downstream 2430 true Chr03: 40016174-40018603 Glycine max
Glyma.03G189200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40017604-40018603 Glycine max
Glyma.03G189200 2.0kb upstream 2.0kb upstream 3430 true Chr03: 40014174-40017603 Glycine max
Glyma.03G189200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40014174-40016173 Glycine max
Glyma.03G189200 2.0kb downstream 2.0kb downstream 3430 true Chr03: 40016174-40019603 Glycine max
Glyma.03G189200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40017604-40019603 Glycine max
Glyma.03G189200 5.0kb upstream 5.0kb upstream 6430 true Chr03: 40011174-40017603 Glycine max
Glyma.03G189200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40011174-40016173 Glycine max
Glyma.03G189200 5.0kb downstream 5.0kb downstream 6430 true Chr03: 40016174-40022603 Glycine max
Glyma.03G189200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40017604-40022603 Glycine max
Glyma.03G189200 10.0kb upstream 10.0kb upstream 11430 true Chr03: 40006174-40017603 Glycine max
Glyma.03G189200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40006174-40016173 Glycine max
Glyma.03G189200 10.0kb downstream 10.0kb downstream 11430 true Chr03: 40016174-40027603 Glycine max
Glyma.03G189200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40017604-40027603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315105 5265 Fabidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.316821 0.0 1.60133    
cufflinks 0.0194969 0.0 0.0904433 Low Low
cufflinks 0.626278 0.0 2.87567    
cufflinks 2.86896 0.0 9.38897   High
cufflinks 0.344499 0.0 2.31013    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0371311 0.0 0.155606 Low  
cufflinks 0.074     Low  
cufflinks 0.045     Low  
cufflinks 0.384       High
cufflinks 0.089     Low High
cufflinks 0.039     Low  
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 0.018     Low  
cufflinks 0.005     Low Low
cufflinks 0.011     Low  
cufflinks 0.013     Low  
cufflinks 0.037     Low  
cufflinks 0.004     Low Low
cufflinks 0.018     Low  
cufflinks 0.061        
cufflinks 0.008     Low  
cufflinks 0.017     Low  

0 Strain