Gene : Glyma.19G110900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23237 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 Genomic Order:  1109
Name:  ? Glyma.19G110900 Secondary Identifier:  ? PAC:30511284
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G110900 0.5kb upstream 0.5kb upstream 2881 true Chr19: 36510664-36513544 Glycine max
Glyma.19G110900 0.5kb upstream 0.5kb upstream 500 false Chr19: 36510664-36511163 Glycine max
Glyma.19G110900 0.5kb downstream 0.5kb downstream 2881 true Chr19: 36511164-36514044 Glycine max
Glyma.19G110900 0.5kb downstream 0.5kb downstream 500 false Chr19: 36513545-36514044 Glycine max
Glyma.19G110900 1.0kb upstream 1.0kb upstream 3381 true Chr19: 36510164-36513544 Glycine max
Glyma.19G110900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 36510164-36511163 Glycine max
Glyma.19G110900 1.0kb downstream 1.0kb downstream 3381 true Chr19: 36511164-36514544 Glycine max
Glyma.19G110900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 36513545-36514544 Glycine max
Glyma.19G110900 2.0kb upstream 2.0kb upstream 4381 true Chr19: 36509164-36513544 Glycine max
Glyma.19G110900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 36509164-36511163 Glycine max
Glyma.19G110900 2.0kb downstream 2.0kb downstream 4381 true Chr19: 36511164-36515544 Glycine max
Glyma.19G110900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 36513545-36515544 Glycine max
Glyma.19G110900 5.0kb upstream 5.0kb upstream 7381 true Chr19: 36506164-36513544 Glycine max
Glyma.19G110900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 36506164-36511163 Glycine max
Glyma.19G110900 5.0kb downstream 5.0kb downstream 7381 true Chr19: 36511164-36518544 Glycine max
Glyma.19G110900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 36513545-36518544 Glycine max
Glyma.19G110900 10.0kb upstream 10.0kb upstream 12381 true Chr19: 36501164-36513544 Glycine max
Glyma.19G110900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 36501164-36511163 Glycine max
Glyma.19G110900 10.0kb downstream 10.0kb downstream 12381 true Chr19: 36511164-36523544 Glycine max
Glyma.19G110900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 36513545-36523544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305807 5265 Fabidae View MSA
124060863 5270 Rosid View MSA
123746440 5271 Pentapetalae View MSA
122789002 5272 Eudicot View MSA
122045887 5273 Angiosperm View MSA
121346687 5274 Embryophyte View MSA
123425060 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.76433 0.0 23.2803    
cufflinks 18.0843 0.0 49.5576    
cufflinks 5.61781 0.0 17.6789   Low
cufflinks 13.4667 0.0 37.8181    
cufflinks 29.9998 0.0 80.1528 High  
cufflinks 16.5832 0.0 45.6507    
cufflinks 108.776 0.0 311.563 High High
cufflinks 12.9412 0.0 36.5796    
cufflinks 18.9454 0.0 51.702    
cufflinks 2.587        
cufflinks 1.104       Low
cufflinks 3.252        
cufflinks 11.877     High High
cufflinks 15.72     High High
cufflinks 0.694       Low
cufflinks 3.505        
cufflinks 1.597        
cufflinks 3.421        
cufflinks 5.252        
cufflinks 1.665        
cufflinks 1.715        
cufflinks 2.167        
cufflinks 3.123        
cufflinks 0.964       Low
cufflinks 2.624        
cufflinks 2.536        

0 Strain