Gene : Glyma.03G191200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR15921 - PRE-MRNA CLEAVAGE COMPLEX II Genomic Order:  1912
Name:  ? Glyma.03G191200 Secondary Identifier:  ? PAC:30518570
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G191200 0.5kb upstream 0.5kb upstream 6710 true Chr03: 40195820-40202529 Glycine max
Glyma.03G191200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40195820-40196319 Glycine max
Glyma.03G191200 0.5kb downstream 0.5kb downstream 6710 true Chr03: 40196320-40203029 Glycine max
Glyma.03G191200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40202530-40203029 Glycine max
Glyma.03G191200 1.0kb upstream 1.0kb upstream 7210 true Chr03: 40195320-40202529 Glycine max
Glyma.03G191200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40195320-40196319 Glycine max
Glyma.03G191200 1.0kb downstream 1.0kb downstream 7210 true Chr03: 40196320-40203529 Glycine max
Glyma.03G191200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40202530-40203529 Glycine max
Glyma.03G191200 2.0kb upstream 2.0kb upstream 8210 true Chr03: 40194320-40202529 Glycine max
Glyma.03G191200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40194320-40196319 Glycine max
Glyma.03G191200 2.0kb downstream 2.0kb downstream 8210 true Chr03: 40196320-40204529 Glycine max
Glyma.03G191200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40202530-40204529 Glycine max
Glyma.03G191200 5.0kb upstream 5.0kb upstream 11210 true Chr03: 40191320-40202529 Glycine max
Glyma.03G191200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40191320-40196319 Glycine max
Glyma.03G191200 5.0kb downstream 5.0kb downstream 11210 true Chr03: 40196320-40207529 Glycine max
Glyma.03G191200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40202530-40207529 Glycine max
Glyma.03G191200 10.0kb upstream 10.0kb upstream 16210 true Chr03: 40186320-40202529 Glycine max
Glyma.03G191200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40186320-40196319 Glycine max
Glyma.03G191200 10.0kb downstream 10.0kb downstream 16210 true Chr03: 40196320-40212529 Glycine max
Glyma.03G191200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40202530-40212529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300860 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.57747 0.0 17.2982   High
cufflinks 3.66113 0.0 14.4031    
cufflinks 2.72114 0.0 10.3826   Low
cufflinks 4.19505 0.0 16.2991    
cufflinks 4.08701 0.0 17.3622    
cufflinks 2.91098 0.0 12.0677   Low
cufflinks 4.63197 0.0 17.8526   High
cufflinks 3.35975 0.0 12.0729    
cufflinks 3.46915 0.0 13.8718    
cufflinks 0.658        
cufflinks 0.503       Low
cufflinks 0.779        
cufflinks 1.039       High
cufflinks 1.176       High
cufflinks 0.479       Low
cufflinks 0.788        
cufflinks 0.612        
cufflinks 0.908        
cufflinks 0.969        
cufflinks 0.801        
cufflinks 0.562       Low
cufflinks 0.819        
cufflinks 1.027       High
cufflinks 0.665        
cufflinks 0.74        
cufflinks 0.605        

0 Strain