Gene : Glyma.19G111200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  1112
Name:  ? Glyma.19G111200 Secondary Identifier:  ? PAC:30513793
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G111200 0.5kb upstream 0.5kb upstream 5347 true Chr19: 36547977-36553323 Glycine max
Glyma.19G111200 0.5kb upstream 0.5kb upstream 500 false Chr19: 36552824-36553323 Glycine max
Glyma.19G111200 0.5kb downstream 0.5kb downstream 5347 true Chr19: 36547477-36552823 Glycine max
Glyma.19G111200 0.5kb downstream 0.5kb downstream 500 false Chr19: 36547477-36547976 Glycine max
Glyma.19G111200 1.0kb upstream 1.0kb upstream 5847 true Chr19: 36547977-36553823 Glycine max
Glyma.19G111200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 36552824-36553823 Glycine max
Glyma.19G111200 1.0kb downstream 1.0kb downstream 5847 true Chr19: 36546977-36552823 Glycine max
Glyma.19G111200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 36546977-36547976 Glycine max
Glyma.19G111200 2.0kb upstream 2.0kb upstream 6847 true Chr19: 36547977-36554823 Glycine max
Glyma.19G111200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 36552824-36554823 Glycine max
Glyma.19G111200 2.0kb downstream 2.0kb downstream 6847 true Chr19: 36545977-36552823 Glycine max
Glyma.19G111200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 36545977-36547976 Glycine max
Glyma.19G111200 5.0kb upstream 5.0kb upstream 9847 true Chr19: 36547977-36557823 Glycine max
Glyma.19G111200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 36552824-36557823 Glycine max
Glyma.19G111200 5.0kb downstream 5.0kb downstream 9847 true Chr19: 36542977-36552823 Glycine max
Glyma.19G111200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 36542977-36547976 Glycine max
Glyma.19G111200 10.0kb upstream 10.0kb upstream 14847 true Chr19: 36547977-36562823 Glycine max
Glyma.19G111200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 36552824-36562823 Glycine max
Glyma.19G111200 10.0kb downstream 10.0kb downstream 14847 true Chr19: 36537977-36552823 Glycine max
Glyma.19G111200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 36537977-36547976 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316484 5265 Fabidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.95935 0.0 24.9629   Low
cufflinks 9.83155 0.0 40.7434    
cufflinks 10.5725 0.0 42.2181    
cufflinks 10.5564 0.0 42.6236    
cufflinks 6.1915 0.0 25.8197   Low
cufflinks 8.39176 0.0 31.6297    
cufflinks 9.347 0.0 39.282    
cufflinks 6.92691 0.0 27.9853    
cufflinks 9.82694 0.0 40.0467    
cufflinks 0.901       Low
cufflinks 2.1       High
cufflinks 1.738        
cufflinks 1.054        
cufflinks 0.677       Low
cufflinks 1.33        
cufflinks 1.38        
cufflinks 1.134        
cufflinks 1.727        
cufflinks 1.814       High
cufflinks 1.247        
cufflinks 1.244        
cufflinks 1.365        
cufflinks 1.271        
cufflinks 2.171       High
cufflinks 1.272        
cufflinks 1.124        

0 Strain