Gene : Glyma.03G194300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33601:SF7 - PROTEIN LITTLE ZIPPER 3 Genomic Order:  1943
Name:  ? Glyma.03G194300 Secondary Identifier:  ? PAC:30515861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G194300 0.5kb upstream 0.5kb upstream 2569 true Chr03: 40499247-40501815 Glycine max
Glyma.03G194300 0.5kb upstream 0.5kb upstream 500 false Chr03: 40499247-40499746 Glycine max
Glyma.03G194300 0.5kb downstream 0.5kb downstream 2569 true Chr03: 40499747-40502315 Glycine max
Glyma.03G194300 0.5kb downstream 0.5kb downstream 500 false Chr03: 40501816-40502315 Glycine max
Glyma.03G194300 1.0kb upstream 1.0kb upstream 3069 true Chr03: 40498747-40501815 Glycine max
Glyma.03G194300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40498747-40499746 Glycine max
Glyma.03G194300 1.0kb downstream 1.0kb downstream 3069 true Chr03: 40499747-40502815 Glycine max
Glyma.03G194300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40501816-40502815 Glycine max
Glyma.03G194300 2.0kb upstream 2.0kb upstream 4069 true Chr03: 40497747-40501815 Glycine max
Glyma.03G194300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40497747-40499746 Glycine max
Glyma.03G194300 2.0kb downstream 2.0kb downstream 4069 true Chr03: 40499747-40503815 Glycine max
Glyma.03G194300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40501816-40503815 Glycine max
Glyma.03G194300 5.0kb upstream 5.0kb upstream 7069 true Chr03: 40494747-40501815 Glycine max
Glyma.03G194300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40494747-40499746 Glycine max
Glyma.03G194300 5.0kb downstream 5.0kb downstream 7069 true Chr03: 40499747-40506815 Glycine max
Glyma.03G194300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40501816-40506815 Glycine max
Glyma.03G194300 10.0kb upstream 10.0kb upstream 12069 true Chr03: 40489747-40501815 Glycine max
Glyma.03G194300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40489747-40499746 Glycine max
Glyma.03G194300 10.0kb downstream 10.0kb downstream 12069 true Chr03: 40499747-40511815 Glycine max
Glyma.03G194300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40501816-40511815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303227 5265 Fabidae View MSA
124071909 5270 Rosid View MSA
123751498 5271 Pentapetalae View MSA
122790850 5272 Eudicot View MSA
122046003 5273 Angiosperm View MSA
121310535 5274 Embryophyte View MSA
123347994 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.03187 0.0 8.89693    
cufflinks 0.281815 0.0 1.10141    
cufflinks 1.99307 0.0 11.1046    
cufflinks 0.11412 0.0 0.463814 Low Low
cufflinks 0.347706 0.0 1.35326    
cufflinks 3.49493 0.0 13.4348   High
cufflinks 1.74359 0.0 9.94748    
cufflinks 0.818947 0.0 5.16342    
cufflinks 0.178        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.153        
cufflinks 0.078     Low  
cufflinks 0.012     Low Low
cufflinks 0.004     Low Low
cufflinks 0.097     Low  
cufflinks 0.024     Low  
cufflinks 0.266       High
cufflinks 0.144        
cufflinks 0.077     Low  
cufflinks 0.015     Low  
cufflinks 0.069     Low  
cufflinks 0.211       High
cufflinks 0.005     Low Low
cufflinks 0.066     Low  
cufflinks 0.027     Low  

0 Strain