Gene : Glyma.03G193200 G. max Wm82.a2.v1
Genomic Order:  1932 Name:  ? Glyma.03G193200
Secondary Identifier:  ? PAC:30518436
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G193200 0.5kb upstream 0.5kb upstream 4205 true Chr03: 40407096-40411300 Glycine max
Glyma.03G193200 0.5kb upstream 0.5kb upstream 500 false Chr03: 40407096-40407595 Glycine max
Glyma.03G193200 0.5kb downstream 0.5kb downstream 4205 true Chr03: 40407596-40411800 Glycine max
Glyma.03G193200 0.5kb downstream 0.5kb downstream 500 false Chr03: 40411301-40411800 Glycine max
Glyma.03G193200 1.0kb upstream 1.0kb upstream 4705 true Chr03: 40406596-40411300 Glycine max
Glyma.03G193200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40406596-40407595 Glycine max
Glyma.03G193200 1.0kb downstream 1.0kb downstream 4705 true Chr03: 40407596-40412300 Glycine max
Glyma.03G193200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40411301-40412300 Glycine max
Glyma.03G193200 2.0kb upstream 2.0kb upstream 5705 true Chr03: 40405596-40411300 Glycine max
Glyma.03G193200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40405596-40407595 Glycine max
Glyma.03G193200 2.0kb downstream 2.0kb downstream 5705 true Chr03: 40407596-40413300 Glycine max
Glyma.03G193200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40411301-40413300 Glycine max
Glyma.03G193200 5.0kb upstream 5.0kb upstream 8705 true Chr03: 40402596-40411300 Glycine max
Glyma.03G193200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40402596-40407595 Glycine max
Glyma.03G193200 5.0kb downstream 5.0kb downstream 8705 true Chr03: 40407596-40416300 Glycine max
Glyma.03G193200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40411301-40416300 Glycine max
Glyma.03G193200 10.0kb upstream 10.0kb upstream 13705 true Chr03: 40397596-40411300 Glycine max
Glyma.03G193200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40397596-40407595 Glycine max
Glyma.03G193200 10.0kb downstream 10.0kb downstream 13705 true Chr03: 40407596-40421300 Glycine max
Glyma.03G193200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40411301-40421300 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249939 5265 Fabidae Singleton cluster - no MSA
124051657 5270 Rosid View MSA
123736722 5271 Pentapetalae View MSA
122789560 5272 Eudicot View MSA
122050586 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.65788 0.0 20.6773    
cufflinks 2.89215 0.0 17.6059    
cufflinks 0.897823 0.0 5.15277    
cufflinks 4.45029 0.0 19.8719    
cufflinks 0.531808 0.0 4.13596    
cufflinks 0.348324 0.0 2.35824    
cufflinks 0.0918942 0.0 0.36813 Low Low
cufflinks 7.74924 0.0 32.7777   High
cufflinks 0.240889 0.0 1.21762 Low  
cufflinks 1.409       High
cufflinks 0.004     Low Low
cufflinks 0.199        
cufflinks 0.034     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.598        
cufflinks 0.059     Low  
cufflinks 0.398        
cufflinks 0.399        
cufflinks 0.412        
cufflinks 0.006     Low Low
cufflinks 0.652        
cufflinks 0.501        
cufflinks 0.001     Low Low
cufflinks 0.6        
cufflinks 0.005     Low Low

0 Strain