Gene : Glyma.03G193400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10795:SF397 - CUCUMISIN-LIKE PROTEIN Genomic Order:  1934
Name:  ? Glyma.03G193400 Secondary Identifier:  ? PAC:30518115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G193400 0.5kb upstream 0.5kb upstream 5145 true Chr03: 40422314-40427458 Glycine max
Glyma.03G193400 0.5kb upstream 0.5kb upstream 500 false Chr03: 40426959-40427458 Glycine max
Glyma.03G193400 0.5kb downstream 0.5kb downstream 5145 true Chr03: 40421814-40426958 Glycine max
Glyma.03G193400 0.5kb downstream 0.5kb downstream 500 false Chr03: 40421814-40422313 Glycine max
Glyma.03G193400 1.0kb upstream 1.0kb upstream 5645 true Chr03: 40422314-40427958 Glycine max
Glyma.03G193400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40426959-40427958 Glycine max
Glyma.03G193400 1.0kb downstream 1.0kb downstream 5645 true Chr03: 40421314-40426958 Glycine max
Glyma.03G193400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40421314-40422313 Glycine max
Glyma.03G193400 2.0kb upstream 2.0kb upstream 6645 true Chr03: 40422314-40428958 Glycine max
Glyma.03G193400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40426959-40428958 Glycine max
Glyma.03G193400 2.0kb downstream 2.0kb downstream 6645 true Chr03: 40420314-40426958 Glycine max
Glyma.03G193400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40420314-40422313 Glycine max
Glyma.03G193400 5.0kb upstream 5.0kb upstream 9645 true Chr03: 40422314-40431958 Glycine max
Glyma.03G193400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40426959-40431958 Glycine max
Glyma.03G193400 5.0kb downstream 5.0kb downstream 9645 true Chr03: 40417314-40426958 Glycine max
Glyma.03G193400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40417314-40422313 Glycine max
Glyma.03G193400 10.0kb upstream 10.0kb upstream 14645 true Chr03: 40422314-40436958 Glycine max
Glyma.03G193400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40426959-40436958 Glycine max
Glyma.03G193400 10.0kb downstream 10.0kb downstream 14645 true Chr03: 40412314-40426958 Glycine max
Glyma.03G193400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40412314-40422313 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302650 5265 Fabidae View MSA
124074709 5270 Rosid View MSA
123751509 5271 Pentapetalae View MSA
122797256 5272 Eudicot View MSA
122051606 5273 Angiosperm View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0176275 0.0 0.0751193 Low  
cufflinks 0.0261567 0.0 0.108467 Low  
cufflinks 0.0169792 0.0 0.0726478 Low  
cufflinks 0.0815165 0.0 0.321259 Low High
cufflinks 0.0145401 0.0 0.0627829 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0174482 0.0 0.0744025 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.593        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.14       High
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain