Gene : Glyma.03G197900 G. max Wm82.a2.v1
Defline:  (1 of 179) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1979
Name:  ? Glyma.03G197900 Secondary Identifier:  ? PAC:30516883
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G197900 0.5kb upstream 0.5kb upstream 2805 true Chr03: 40720664-40723468 Glycine max
Glyma.03G197900 0.5kb upstream 0.5kb upstream 500 false Chr03: 40720664-40721163 Glycine max
Glyma.03G197900 0.5kb downstream 0.5kb downstream 2805 true Chr03: 40721164-40723968 Glycine max
Glyma.03G197900 0.5kb downstream 0.5kb downstream 500 false Chr03: 40723469-40723968 Glycine max
Glyma.03G197900 1.0kb upstream 1.0kb upstream 3305 true Chr03: 40720164-40723468 Glycine max
Glyma.03G197900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40720164-40721163 Glycine max
Glyma.03G197900 1.0kb downstream 1.0kb downstream 3305 true Chr03: 40721164-40724468 Glycine max
Glyma.03G197900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40723469-40724468 Glycine max
Glyma.03G197900 2.0kb upstream 2.0kb upstream 4305 true Chr03: 40719164-40723468 Glycine max
Glyma.03G197900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40719164-40721163 Glycine max
Glyma.03G197900 2.0kb downstream 2.0kb downstream 4305 true Chr03: 40721164-40725468 Glycine max
Glyma.03G197900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40723469-40725468 Glycine max
Glyma.03G197900 5.0kb upstream 5.0kb upstream 7305 true Chr03: 40716164-40723468 Glycine max
Glyma.03G197900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40716164-40721163 Glycine max
Glyma.03G197900 5.0kb downstream 5.0kb downstream 7305 true Chr03: 40721164-40728468 Glycine max
Glyma.03G197900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40723469-40728468 Glycine max
Glyma.03G197900 10.0kb upstream 10.0kb upstream 12305 true Chr03: 40711164-40723468 Glycine max
Glyma.03G197900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40711164-40721163 Glycine max
Glyma.03G197900 10.0kb downstream 10.0kb downstream 12305 true Chr03: 40721164-40733468 Glycine max
Glyma.03G197900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40723469-40733468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303450 5265 Fabidae View MSA
124070729 5270 Rosid View MSA
123746448 5271 Pentapetalae View MSA
122785794 5272 Eudicot View MSA
122050248 5273 Angiosperm View MSA
121311822 5274 Embryophyte View MSA
123349064 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9273 0.0 17.9481   High
cufflinks 0.0597822 0.0 0.247905 Low Low
cufflinks 0.276304 0.0 1.07205    
cufflinks 0.10905 0.0 0.438237 Low  
cufflinks 0.171711 0.0 0.678808 Low  
cufflinks 0.416982 0.0 1.59074    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.239221 0.0 0.934053    
cufflinks 0.101434 0.0 0.40907 Low  
cufflinks 3.286       High
cufflinks 3.477       High
cufflinks 0.417        
cufflinks 0.425        
cufflinks 0.068     Low Low
cufflinks 0.276        
cufflinks 0.501        
cufflinks 1.766        
cufflinks 0.319        
cufflinks 0.154        
cufflinks 0.155        
cufflinks 0.676        
cufflinks 0.388        
cufflinks 0.447        
cufflinks 1.902       High
cufflinks 0.083     Low Low
cufflinks 2.931       High

0 Strain