Gene : Glyma.03G201800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11076:SF35 - PROTEIN CHROMOSOME TRANSMISSION FIDELITY 7 Genomic Order:  2018
Name:  ? Glyma.03G201800 Secondary Identifier:  ? PAC:30516636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G201800 0.5kb upstream 0.5kb upstream 1282 true Chr03: 41008486-41009767 Glycine max
Glyma.03G201800 0.5kb upstream 0.5kb upstream 500 false Chr03: 41009268-41009767 Glycine max
Glyma.03G201800 0.5kb downstream 0.5kb downstream 1282 true Chr03: 41007986-41009267 Glycine max
Glyma.03G201800 0.5kb downstream 0.5kb downstream 500 false Chr03: 41007986-41008485 Glycine max
Glyma.03G201800 1.0kb upstream 1.0kb upstream 1782 true Chr03: 41008486-41010267 Glycine max
Glyma.03G201800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41009268-41010267 Glycine max
Glyma.03G201800 1.0kb downstream 1.0kb downstream 1782 true Chr03: 41007486-41009267 Glycine max
Glyma.03G201800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41007486-41008485 Glycine max
Glyma.03G201800 2.0kb upstream 2.0kb upstream 2782 true Chr03: 41008486-41011267 Glycine max
Glyma.03G201800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41009268-41011267 Glycine max
Glyma.03G201800 2.0kb downstream 2.0kb downstream 2782 true Chr03: 41006486-41009267 Glycine max
Glyma.03G201800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41006486-41008485 Glycine max
Glyma.03G201800 5.0kb upstream 5.0kb upstream 5782 true Chr03: 41008486-41014267 Glycine max
Glyma.03G201800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41009268-41014267 Glycine max
Glyma.03G201800 5.0kb downstream 5.0kb downstream 5782 true Chr03: 41003486-41009267 Glycine max
Glyma.03G201800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41003486-41008485 Glycine max
Glyma.03G201800 10.0kb upstream 10.0kb upstream 10782 true Chr03: 41008486-41019267 Glycine max
Glyma.03G201800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41009268-41019267 Glycine max
Glyma.03G201800 10.0kb downstream 10.0kb downstream 10782 true Chr03: 40998486-41009267 Glycine max
Glyma.03G201800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40998486-41008485 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612089 5273 Angiosperm Singleton cluster - no MSA
122245498 5265 Fabidae Singleton cluster - no MSA
123989616 5270 Rosid Singleton cluster - no MSA
123564705 5271 Pentapetalae Singleton cluster - no MSA
122599474 5272 Eudicot Singleton cluster - no MSA
120884314 5274 Embryophyte Singleton cluster - no MSA
122925118 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.60312 0.0 5.90218   High
cufflinks 0.214242 0.0 0.859377    
cufflinks 0.456875 0.0 1.78041    
cufflinks 0.523141 0.0 2.02684    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.41264 0.0 1.61395    
cufflinks 0.107451 0.0 0.444978 Low Low
cufflinks 0.541205 0.0 2.09335    
cufflinks 0.433        
cufflinks 0.416        
cufflinks 1.541        
cufflinks 0.754        
cufflinks 1.27        
cufflinks 1.887        
cufflinks 1.807        
cufflinks 0.094       Low
cufflinks 0.976        
cufflinks 3.394       High
cufflinks 1.297        
cufflinks 0.774        
cufflinks 1.752        
cufflinks 3.883       High
cufflinks 0.243       Low
cufflinks 1.805        
cufflinks 0.141       Low

0 Strain