Gene : Glyma.03G150800 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  1508
Name:  ? Glyma.03G150800 Secondary Identifier:  ? PAC:30518733
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G150800 0.5kb upstream 0.5kb upstream 5289 true Chr03: 36579199-36584487 Glycine max
Glyma.03G150800 0.5kb upstream 0.5kb upstream 500 false Chr03: 36579199-36579698 Glycine max
Glyma.03G150800 0.5kb downstream 0.5kb downstream 5289 true Chr03: 36579699-36584987 Glycine max
Glyma.03G150800 0.5kb downstream 0.5kb downstream 500 false Chr03: 36584488-36584987 Glycine max
Glyma.03G150800 1.0kb upstream 1.0kb upstream 5789 true Chr03: 36578699-36584487 Glycine max
Glyma.03G150800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36578699-36579698 Glycine max
Glyma.03G150800 1.0kb downstream 1.0kb downstream 5789 true Chr03: 36579699-36585487 Glycine max
Glyma.03G150800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36584488-36585487 Glycine max
Glyma.03G150800 2.0kb upstream 2.0kb upstream 6789 true Chr03: 36577699-36584487 Glycine max
Glyma.03G150800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36577699-36579698 Glycine max
Glyma.03G150800 2.0kb downstream 2.0kb downstream 6789 true Chr03: 36579699-36586487 Glycine max
Glyma.03G150800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36584488-36586487 Glycine max
Glyma.03G150800 5.0kb upstream 5.0kb upstream 9789 true Chr03: 36574699-36584487 Glycine max
Glyma.03G150800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36574699-36579698 Glycine max
Glyma.03G150800 5.0kb downstream 5.0kb downstream 9789 true Chr03: 36579699-36589487 Glycine max
Glyma.03G150800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36584488-36589487 Glycine max
Glyma.03G150800 10.0kb upstream 10.0kb upstream 14789 true Chr03: 36569699-36584487 Glycine max
Glyma.03G150800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36569699-36579698 Glycine max
Glyma.03G150800 10.0kb downstream 10.0kb downstream 14789 true Chr03: 36579699-36594487 Glycine max
Glyma.03G150800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36584488-36594487 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122309857 5265 Fabidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8157 0.0 36.959    
cufflinks 10.2526 0.0 27.761   Low
cufflinks 17.0079 0.0 45.3768   High
cufflinks 10.7583 0.0 29.0483    
cufflinks 11.4937 0.0 30.9123    
cufflinks 14.971 0.0 39.981   High
cufflinks 10.3709 0.0 28.0624   Low
cufflinks 13.5947 0.0 36.3927    
cufflinks 11.9459 0.0 32.0967    
cufflinks 4.486        
cufflinks 6.087     High  
cufflinks 5.832        
cufflinks 3.495       Low
cufflinks 3.157       Low
cufflinks 5.321     High  
cufflinks 6.257        
cufflinks 5.587        
cufflinks 5.285        
cufflinks 5.262        
cufflinks 7.116     High High
cufflinks 6.381     High  
cufflinks 6.469        
cufflinks 5.74        
cufflinks 6.329     High  
cufflinks 6.282        
cufflinks 6.44     High  

0 Strain