Gene : Glyma.03G149500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  1495
Name:  ? Glyma.03G149500 Secondary Identifier:  ? PAC:30516300
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G149500 0.5kb upstream 0.5kb upstream 4014 true Chr03: 36483290-36487303 Glycine max
Glyma.03G149500 0.5kb upstream 0.5kb upstream 500 false Chr03: 36486804-36487303 Glycine max
Glyma.03G149500 0.5kb downstream 0.5kb downstream 4014 true Chr03: 36482790-36486803 Glycine max
Glyma.03G149500 0.5kb downstream 0.5kb downstream 500 false Chr03: 36482790-36483289 Glycine max
Glyma.03G149500 1.0kb upstream 1.0kb upstream 4514 true Chr03: 36483290-36487803 Glycine max
Glyma.03G149500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 36486804-36487803 Glycine max
Glyma.03G149500 1.0kb downstream 1.0kb downstream 4514 true Chr03: 36482290-36486803 Glycine max
Glyma.03G149500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 36482290-36483289 Glycine max
Glyma.03G149500 2.0kb upstream 2.0kb upstream 5514 true Chr03: 36483290-36488803 Glycine max
Glyma.03G149500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 36486804-36488803 Glycine max
Glyma.03G149500 2.0kb downstream 2.0kb downstream 5514 true Chr03: 36481290-36486803 Glycine max
Glyma.03G149500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 36481290-36483289 Glycine max
Glyma.03G149500 5.0kb upstream 5.0kb upstream 8514 true Chr03: 36483290-36491803 Glycine max
Glyma.03G149500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 36486804-36491803 Glycine max
Glyma.03G149500 5.0kb downstream 5.0kb downstream 8514 true Chr03: 36478290-36486803 Glycine max
Glyma.03G149500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 36478290-36483289 Glycine max
Glyma.03G149500 10.0kb upstream 10.0kb upstream 13514 true Chr03: 36483290-36496803 Glycine max
Glyma.03G149500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 36486804-36496803 Glycine max
Glyma.03G149500 10.0kb downstream 10.0kb downstream 13514 true Chr03: 36473290-36486803 Glycine max
Glyma.03G149500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 36473290-36483289 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254300 5265 Fabidae View MSA
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142221 0.0 0.555137 Low Low
cufflinks 0.28868 0.0 1.09314    
cufflinks 0.174769 0.0 0.67682 Low Low
cufflinks 1.52272 0.0 5.15563   High
cufflinks 1.50868 0.0 5.10825    
cufflinks 1.4515 0.0 4.94992    
cufflinks 0.906521 0.0 3.22201    
cufflinks 0.885539 0.0 3.14672    
cufflinks 0.505618 0.0 1.86324    
cufflinks 1.104       High
cufflinks 0.148        
cufflinks 0.326        
cufflinks 1.119       High
cufflinks 1.29       High
cufflinks 0.044     Low  
cufflinks 0.128        
cufflinks 0.256        
cufflinks 0.468        
cufflinks 0.151        
cufflinks 0.036     Low Low
cufflinks 0.165        
cufflinks 0.042     Low Low
cufflinks 0.036     Low Low
cufflinks 0.027     Low Low
cufflinks 0.051     Low  
cufflinks 0.173        

0 Strain